Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G00872 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 5.4e-90 334.3 172 100.0
AL6G52570 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 7.8e-81 303.9 173 90.8
Carub.0006s3590 Capsella rubella HOM05D007968 ORTHO05D010203 1.4e-58 229.9 170 71.2
CARHR045840 Cardamine hirsuta HOM05D007968 ORTHO05D010203 9.3e-58 227.3 174 70.7
CARHR043880 Cardamine hirsuta HOM05D007968 ORTHO05D010203 2.7e-57 225.7 174 71.8
AL1G64370 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 6.0e-57 224.6 173 69.4
CARHR044320 Cardamine hirsuta HOM05D007968 ORTHO05D010203 2.4e-53 212.6 172 68.0
BcaB07g33167 Brassica carinata HOM05D007968 ORTHO05D010203 1.0e-48 197.2 179 60.9
BraSC56t46384Z Brassica rapa HOM05D007968 ORTHO05D010203 2.3e-48 196.1 180 60.6
Thhalv10011943m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 5.1e-48 194.9 172 59.9
Sp1g41750 Schrenkiella parvula HOM05D007968 ORTHO05D010203 1.3e-46 190.3 178 59.0
Carub.0001s4453 Capsella rubella HOM05D007968 ORTHO05D010203 1.4e-45 186.8 176 59.7
BcaC08g43678 Brassica carinata HOM05D007968 ORTHO05D010203 5.3e-45 184.9 180 58.3
BolC6t36179H Brassica oleracea HOM05D007968 ORTHO05D010203 1.2e-44 183.7 183 57.4
CARHR045850 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.3e-43 180.3 172 60.5
C06p10970 Brassica napus HOM05D007968 ORTHO05D010203 2.3e-40 169.5 176 55.7
Aa31LG10G150 Aethionema arabicum HOM05D007968 ORTHO05D010203 2.3e-32 142.9 181 45.3
THA.LOC104822174 Tarenaya hassleriana HOM05D007968 ORTHO05D010203 3.3e-31 139.0 168 44.6
Potri.007G068300 Populus trichocarpa HOM05D007968 ORTHO05D010203 4.2e-26 122.1 175 39.4
Gohir.A11G291900 Gossypium hirsutum HOM05D007968 ORTHO05D010203 8.7e-24 114.4 154 40.9
Sabra07G0056100 Salix brachista HOM05D007968 ORTHO05D010203 1.9e-23 113.2 182 36.8
Duzib213G0484 Durio zibethinus HOM05D007968 ORTHO05D010203 5.7e-23 111.7 170 38.2
Gohir.A11G291800 Gossypium hirsutum HOM05D007968 ORTHO05D010203 7.4e-23 111.3 170 39.4
Thhalv10026370m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 3.7e-22 109.0 170 40.6
Gorai.007G336400 Gossypium raimondii HOM05D007968 ORTHO05D010203 3.7e-22 109.0 154 39.0
Thecc.07G160500 Theobroma cacao HOM05D007968 ORTHO05D010203 4.8e-22 108.6 171 39.2
Manes.14G011600 Manihot esculenta HOM05D007968 ORTHO05D010203 8.2e-22 107.8 177 37.3
Gohir.D11G300503 Gossypium hirsutum HOM05D007968 ORTHO05D010203 1.8e-21 106.7 154 38.3
TWI38G1770 Tripterygium wilfordii HOM05D007968 ORTHO05D010203 5.3e-21 105.1 175 37.1
AT3G12880 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 6.9e-21 104.8 177 35.0
COL.COLO4_38368 Corchorus olitorius HOM05D007968 ORTHO05D010203 2.6e-20 102.8 175 35.4
Gohir.A11G292000 Gossypium hirsutum HOM05D007968 ORTHO05D010203 2.6e-20 102.8 170 37.1
AL3G24550 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 5.9e-20 101.7 177 34.5
AT1G56100 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 5.9e-20 101.7 98 60.2
Gorai.007G336600 Gossypium raimondii HOM05D007968 ORTHO05D010203 1.7e-19 100.1 170 34.7
Sp3g11020 Schrenkiella parvula HOM05D007968 ORTHO05D010203 2.9e-19 99.4 174 35.1
TAR365G1166 Trochodendron aralioides HOM05D007968 ORTHO05D010203 2.9e-19 99.4 155 38.7
QL04p077228 Quercus lobata HOM05D007968 ORTHO05D010203 1.1e-18 97.4 168 36.3
Cfa019410 Carpinus fangiana HOM05D007968 ORTHO05D010203 1.4e-18 97.1 165 35.2
Carub.0003s1224 Capsella rubella HOM05D007968 ORTHO05D010203 5.5e-18 95.1 174 33.3
Thhalv10022116m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 5.5e-18 95.1 175 33.7
A05p36620 Brassica napus HOM05D007968 ORTHO05D010203 7.2e-18 94.7 171 34.5
BraA05t22464Z Brassica rapa HOM05D007968 ORTHO05D010203 7.2e-18 94.7 171 34.5
Haze_07836 Corylus avellana HOM05D007968 ORTHO05D010203 7.2e-18 94.7 171 33.9
Gohir.D11G300400 Gossypium hirsutum HOM05D007968 ORTHO05D010203 1.6e-17 93.6 170 33.5
AL7G39620 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 2.1e-17 93.2 168 35.7
AL7G39610 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 3.6e-17 92.4 150 35.3
PSO210G7553 Papaver somniferum HOM05D007968 ORTHO05D010203 3.6e-17 92.4 174 35.6
AT4G15750 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 4.7e-17 92.0 173 35.3
CARHR087400 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.0e-16 90.9 172 34.3
BcaB06g25504 Brassica carinata HOM05D007968 ORTHO05D010203 3.0e-16 89.4 168 35.1
CiPaw.11G064900 Carya illinoinensis HOM05D007968 ORTHO05D010203 3.0e-16 89.4 177 31.1
PSO447G0373 Papaver somniferum HOM05D007968 ORTHO05D010203 6.7e-16 88.2 174 33.3
Gorai.007G336500 Gossypium raimondii HOM05D007968 ORTHO05D010203 7.4e-15 84.7 137 38.7
Atru.chr1.195 Acer truncatum HOM05D007968 ORTHO05D010203 2.8e-14 82.8 164 29.9
CARHR045830 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.4e-13 80.5 86 54.7
Actinidia12776 Actinidia chinensis HOM05D007968 ORTHO05D010203 3.1e-13 79.3 174 31.6
Ciclev10006004m.g Citrus clementina HOM05D007968 ORTHO05D010203 3.1e-13 79.3 171 36.3
BcaC05g29230 Brassica carinata HOM05D007968 ORTHO05D010203 5.3e-13 78.6 171 31.6
Glyma.08G168633 Glycine max HOM05D007968 ORTHO05D010203 1.5e-12 77.0 159 28.9
PSO761G0418 Papaver somniferum HOM05D007968 ORTHO05D010203 2.0e-12 76.6 173 33.5
Thhalv10026402m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 1.3e-11 73.9 169 35.5
Actinidia07366 Actinidia chinensis HOM05D007968 ORTHO05D010203 2.9e-11 72.8 179 29.6
Rhsim06G0240300 Rhododendron simsii HOM05D007968 ORTHO05D010203 1.4e-10 70.5 181 29.8
Medtr2g067530 Medicago truncatula HOM05D007968 ORTHO05D010203 9.4e-10 67.8 158 24.7
Prupe.4G137400 Prunus persica HOM05D007968 ORTHO05D010203 1.0e-08 64.3 136 30.1
C05p55050 Brassica napus HOM05D007968 ORTHO05D010203 6.7e-08 61.6 130 30.0
BolC5t34173H Brassica oleracea HOM05D007968 ORTHO05D010203 6.7e-08 61.6 130 30.0
CANSAT80G0444 Cannabis sativa HOM05D007968 ORTHO05D010203 3.3e-07 59.3 173 26.6


User provided reference genes

Program Settings