Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G00232 Arabidopsis thaliana HOM05D021174 ORTHO05D021380 8.6e-79 297.0 155 100.0
AL7G47500 Arabidopsis lyrata HOM05D021174 ORTHO05D021380 1.7e-42 176.4 166 63.3
AT5G41765 Arabidopsis thaliana HOM05D021174 ORTHO05D021380 7.4e-22 107.8 147 53.1
Carub.0006s2669 Capsella rubella HOM05D021174 ORTHO05D021380 1.1e-20 104.0 168 42.3
Carub.0003s3528 Capsella rubella HOM05D021174 ORTHO05D021380 1.2e-16 90.5 153 41.2
Carub.0006s2668 Capsella rubella HOM05D021174 ORTHO05D021380 2.3e-15 86.3 172 36.0
Aa31LG2G9100 Aethionema arabicum HOM05D000538 ORTHO05D000614 1.9e-14 83.2 143 40.6
Carub.0003s3527 Capsella rubella HOM05D000538 ORTHO05D000614 2.4e-12 76.3 142 42.3
BcaB07g31281 Brassica carinata HOM05D000538 ORTHO05D000614 3.1e-12 75.9 144 35.4
BcaC02g10543 Brassica carinata HOM05D000538 ORTHO05D000614 4.1e-12 75.5 133 36.1
C04p27660 Brassica napus HOM05D000538 ORTHO05D000614 4.1e-12 75.5 133 36.1
BolC4t24311H Brassica oleracea HOM05D000538 ORTHO05D000614 4.1e-12 75.5 133 36.1
BcaC06g31859 Brassica carinata HOM05D000538 ORTHO05D000614 6.9e-12 74.7 157 36.3
CARHR050610 Cardamine hirsuta HOM05D000538 ORTHO05D000614 6.9e-12 74.7 115 42.6
Sp2g02820 Schrenkiella parvula HOM05D000538 ORTHO05D000614 1.2e-11 73.9 143 39.2
BcaC04g22347 Brassica carinata HOM05D000538 ORTHO05D000614 1.5e-11 73.6 138 36.2
A01p30590 Brassica napus HOM05D000538 ORTHO05D000614 1.5e-11 73.6 128 35.2
A09p16670 Brassica napus HOM05D000538 ORTHO05D000614 1.5e-11 73.6 145 35.9
C09p20300 Brassica napus HOM05D000538 ORTHO05D000614 1.5e-11 73.6 138 36.2
BolC9t54934H Brassica oleracea HOM05D000538 ORTHO05D000614 1.5e-11 73.6 138 36.2
BraA01t03191Z Brassica rapa HOM05D000538 ORTHO05D000614 1.5e-11 73.6 128 35.2
BraA09t37306Z Brassica rapa HOM05D000538 ORTHO05D000614 1.5e-11 73.6 145 35.9
Sp7g05700 Schrenkiella parvula HOM05D000538 ORTHO05D000614 1.5e-11 73.6 150 39.3
Carub.0003s3541 Capsella rubella HOM05D000538 ORTHO05D000614 3.4e-11 72.4 135 36.3
A03p67190 Brassica napus HOM05D000538 ORTHO05D000614 4.5e-11 72.0 155 35.5
BraA01t02756Z Brassica rapa HOM05D000538 ORTHO05D000614 4.5e-11 72.0 155 35.5
BraA04t16712Z Brassica rapa HOM05D009696 ORTHO05D014095 5.9e-11 71.6 145 36.6
Sp7g04750 Schrenkiella parvula HOM05D000538 ORTHO05D000614 5.9e-11 71.6 168 32.1
Carub.0002s0334 Capsella rubella HOM05D000538 ORTHO05D000614 7.7e-11 71.2 114 42.1
A04p10430 Brassica napus HOM05D009696 ORTHO05D014095 2.2e-10 69.7 145 35.9
Sp1g10140 Schrenkiella parvula HOM05D000538 ORTHO05D000614 5.0e-10 68.6 152 34.2
C04p43940 Brassica napus HOM05D009696 ORTHO05D014095 6.5e-10 68.2 145 35.2
BolC1t03848H Brassica oleracea HOM05D000538 ORTHO05D000614 6.5e-10 68.2 128 37.5
THA.LOC104809520 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 6.5e-10 68.2 121 39.7
AL2G14390 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 8.5e-10 67.8 124 37.9
AL7G49490 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 1.1e-09 67.4 133 39.1
Sp7g11190 Schrenkiella parvula HOM05D000538 ORTHO05D000614 1.1e-09 67.4 144 36.8
BcaB06g27693 Brassica carinata HOM05D000538 ORTHO05D000614 1.4e-09 67.0 159 30.8
BraA04t17162Z Brassica rapa HOM05D000538 ORTHO05D000614 1.4e-09 67.0 144 34.7
Thhalv10023503m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 1.4e-09 67.0 145 37.2
C04p49440 Brassica napus HOM05D000538 ORTHO05D000614 1.9e-09 66.6 149 32.9
BcaC02g08887 Brassica carinata HOM05D000538 ORTHO05D000614 2.5e-09 66.2 149 32.9
BolC4t26529H Brassica oleracea HOM05D000538 ORTHO05D000614 2.5e-09 66.2 142 33.1
AL1G63100 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 3.2e-09 65.9 119 40.3
A04p15220 Brassica napus HOM05D000538 ORTHO05D000614 3.2e-09 65.9 142 32.4
COL.COLO4_13007 Corchorus olitorius HOM05D000538 ORTHO05D000614 3.2e-09 65.9 126 32.5
AT1G61730 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 9.4e-09 64.3 124 37.1
BcaC02g09540 Brassica carinata HOM05D009696 ORTHO05D014095 2.1e-08 63.2 140 34.3
Carub.0007s3523 Capsella rubella HOM05D000538 ORTHO05D000614 2.7e-08 62.8 112 40.2
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 2.7e-08 62.8 133 34.6
BcaC07g37349 Brassica carinata HOM05D000538 ORTHO05D000614 6.1e-08 61.6 90 40.0
C08p07930 Brassica napus HOM05D000538 ORTHO05D000614 6.1e-08 61.6 90 40.0
BolC8t47645H Brassica oleracea HOM05D000538 ORTHO05D000614 6.1e-08 61.6 90 40.0
CARHR219220 Cardamine hirsuta HOM05D000538 ORTHO05D000614 6.1e-08 61.6 120 37.5
Duzib248G0414 Durio zibethinus HOM05D000538 ORTHO05D000614 6.1e-08 61.6 108 32.4
AL3G53940 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 7.9e-08 61.2 161 31.7
Carub.0003s3455 Capsella rubella HOM05D000538 ORTHO05D000614 7.9e-08 61.2 136 34.6
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.0e-07 60.8 137 31.4
Lsat_1_v5_gn_3_43101 Lactuca sativa HOM05D000538 ORTHO05D000614 1.0e-07 60.8 116 31.9
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 1.4e-07 60.5 108 36.1
QL05p077181 Quercus lobata HOM05D000538 ORTHO05D000614 1.8e-07 60.1 99 37.4
CARHR011790 Cardamine hirsuta HOM05D000538 ORTHO05D000614 2.3e-07 59.7 160 30.6
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 2.3e-07 59.7 128 31.2
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 3.0e-07 59.3 113 35.4
Gohir.A13G018100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.0e-07 59.3 107 38.3
Actinidia26954 Actinidia chinensis HOM05D000538 ORTHO05D000614 3.9e-07 58.9 109 35.8
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 3.9e-07 58.9 126 34.9
Gohir.D10G203100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.9e-07 58.9 146 34.9
Gorai.011G228000 Gossypium raimondii HOM05D000538 ORTHO05D000614 3.9e-07 58.9 146 34.9
BcaB06g27057 Brassica carinata HOM05D009696 ORTHO05D000614 5.1e-07 58.5 143 32.9
Actinidia24277 Actinidia chinensis HOM05D000538 ORTHO05D000614 6.7e-07 58.2 154 31.2
AL1G22620 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 6.7e-07 58.2 139 32.4
AT4G00610 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 6.7e-07 58.2 104 32.7
BcaB03g16075 Brassica carinata HOM05D000538 ORTHO05D000614 6.7e-07 58.2 141 34.0
C05p09710 Brassica napus HOM05D000538 ORTHO05D000614 6.7e-07 58.2 124 33.1
BolC5t29712H Brassica oleracea HOM05D000538 ORTHO05D000614 6.7e-07 58.2 124 33.1
Gorai.013G021200 Gossypium raimondii HOM05D000538 ORTHO05D000614 6.7e-07 58.2 121 36.4
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 6.7e-07 58.2 138 32.6
SalBow6G5108 Salvia bowleyana HOM05D000538 ORTHO05D000614 6.7e-07 58.2 138 32.6
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 6.7e-07 58.2 126 34.9
AT1G66420 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 8.8e-07 57.8 140 31.4
BcaC02g09411 Brassica carinata HOM05D000538 ORTHO05D000614 8.8e-07 57.8 102 39.2
A04p08610 Brassica napus HOM05D000538 ORTHO05D000614 8.8e-07 57.8 133 30.8
C04p42350 Brassica napus HOM05D000538 ORTHO05D000614 8.8e-07 57.8 102 39.2
BolC4t25817H Brassica oleracea HOM05D000538 ORTHO05D000614 8.8e-07 57.8 102 39.2
Gohir.A10G196200 Gossypium hirsutum HOM05D000538 ORTHO05D000614 8.8e-07 57.8 146 34.9
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.1e-06 57.4 120 35.0
AL3G48460 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 1.1e-06 57.4 132 37.1
MSTRG.14651 Avicennia marina HOM05D000538 ORTHO05D000614 1.1e-06 57.4 137 32.1
A03p67690 Brassica napus HOM05D000538 ORTHO05D000614 1.1e-06 57.4 119 33.6
A03p67700 Brassica napus HOM05D000538 ORTHO05D000614 1.1e-06 57.4 119 33.6
BraA01t02696Z Brassica rapa HOM05D000538 ORTHO05D000614 1.1e-06 57.4 119 33.6
BraA01t02697Z Brassica rapa HOM05D000538 ORTHO05D000614 1.1e-06 57.4 119 33.6
BraA01t02698Z Brassica rapa HOM05D000538 ORTHO05D000614 1.1e-06 57.4 119 33.6
Gohir.D13G019101 Gossypium hirsutum HOM05D000538 ORTHO05D000614 1.5e-06 57.0 121 37.2
Lsat_1_v5_gn_1_81901 Lactuca sativa HOM05D000538 ORTHO05D000614 1.5e-06 57.0 111 35.1
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.5e-06 57.0 126 34.9
Cpa.g.sc1622.1 Carica papaya HOM05D000538 ORTHO05D000614 2.0e-06 56.6 124 32.3
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.0e-06 56.6 145 30.3
AT4G00390 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 2.5e-06 56.2 139 33.8
A06p08130 Brassica napus HOM05D000538 ORTHO05D000614 2.5e-06 56.2 137 32.1
BraA01t02694Z Brassica rapa HOM05D000538 ORTHO05D000614 3.3e-06 55.8 86 38.4
BraA04t16555Z Brassica rapa HOM05D000538 ORTHO05D000614 3.3e-06 55.8 86 38.4
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 3.3e-06 55.8 126 34.9
BraA06t24012Z Brassica rapa HOM05D000538 ORTHO05D000614 4.3e-06 55.5 137 32.1
Lj6g0024738 Lotus japonicus HOM05D000538 ORTHO05D000614 5.7e-06 55.1 131 29.8
BcaC02g09542 Brassica carinata HOM05D009696 ORTHO05D014095 7.4e-06 54.7 143 32.2
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 7.4e-06 54.7 112 31.2
QL93p0073_1288 Quercus lobata HOM05D000538 ORTHO05D000614 7.4e-06 54.7 146 31.5
QL93p0107_0595 Quercus lobata HOM05D000538 ORTHO05D000614 7.4e-06 54.7 91 36.3
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 9.7e-06 54.3 111 35.1
ECA246G3123 Erigeron canadensis HOM05D000538 ORTHO05D000614 9.7e-06 54.3 110 31.8
Gohir.A01G040800 Gossypium hirsutum HOM05D000538 ORTHO05D000614 9.7e-06 54.3 121 34.7
HanXRQChr03g0087661 Helianthus annuus HOM05D000538 ORTHO05D000614 9.7e-06 54.3 110 32.7


User provided reference genes

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