Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G63230 Arabidopsis thaliana HOM05D013860 ORTHO05D009893 4.1e-89 331.3 156 100.0
AL5G46080 Arabidopsis lyrata HOM05D013860 ORTHO05D009893 1.4e-41 173.3 94 84.0
Carub.0005s2991 Capsella rubella HOM05D013860 ORTHO05D009893 5.7e-30 134.8 103 61.2
Sp5g00310 Schrenkiella parvula HOM05D013860 ORTHO05D009893 2.5e-25 119.4 107 57.0
C04p29970 Brassica napus HOM05D013860 ORTHO05D009893 2.7e-24 115.9 113 56.6
A04p00150 Brassica napus HOM05D013860 ORTHO05D009893 4.7e-24 115.2 110 56.4
BraA04t15737Z Brassica rapa HOM05D013860 ORTHO05D009893 4.7e-24 115.2 110 56.4
BolC4t24530H Brassica oleracea HOM05D013860 ORTHO05D009893 7.9e-24 114.4 113 55.8
Thhalv10006393m.g Eutrema salsugineum HOM05D013860 ORTHO05D009893 5.5e-17 91.7 99 49.5
BcaC02g10346 Brassica carinata HOM05D013860 ORTHO05D009893 3.9e-15 85.5 113 47.8
Haze_04677 Corylus avellana HOM05D008098 ORTHO05D009893 1.9e-09 66.6 52 51.9
CiPaw.07G089300 Carya illinoinensis HOM05D008098 ORTHO05D009893 3.2e-09 65.9 82 41.5
PGR044G2144 Punica granatum HOM05D008098 ORTHO05D009893 6.1e-08 61.6 52 50.0
Hma1.2p1_1572F.1_g291470 Hydrangea macrophylla HOM05D008098 ORTHO05D009893 8.0e-08 61.2 40 67.5
Potri.002G050100 Populus trichocarpa HOM05D008098 ORTHO05D009893 8.0e-08 61.2 45 55.6
Dinv44560 Davidia involucrata HOM05D008098 ORTHO05D009893 1.4e-07 60.5 81 39.5
Dinv14021 Davidia involucrata HOM05D008098 ORTHO05D009893 1.8e-07 60.1 81 38.3
Dinv34781 Davidia involucrata HOM05D008098 ORTHO05D009893 3.0e-07 59.3 76 39.5
TAR633G0062 Trochodendron aralioides HOM05D008098 ORTHO05D009893 3.0e-07 59.3 55 49.1
MSTRG.12554 Avicennia marina HOM05D008098 ORTHO05D009893 4.0e-07 58.9 75 41.3
Sabra05G0162400 Salix brachista HOM05D008098 ORTHO05D009893 5.2e-07 58.5 44 56.8
TAR633G1927 Trochodendron aralioides HOM05D008098 ORTHO05D009893 5.2e-07 58.5 55 49.1
Cfa006173 Carpinus fangiana HOM05D008098 ORTHO05D009893 6.7e-07 58.2 52 46.2
Duzib138G1817 Durio zibethinus HOM05D008098 ORTHO05D009893 8.8e-07 57.8 51 47.1
PSO170G2914 Papaver somniferum HOM05D008098 ORTHO05D009893 1.5e-06 57.0 75 40.0
Dinv17090 Davidia involucrata HOM05D008098 ORTHO05D009893 2.0e-06 56.6 41 58.5
Manes.15G031000 Manihot esculenta HOM05D008098 ORTHO05D009893 2.0e-06 56.6 68 42.6
THA.LOC104817560 Tarenaya hassleriana HOM05D013860 ORTHO05D009893 2.0e-06 56.6 84 42.9
Prupe.1G018100 Prunus persica HOM05D008098 ORTHO05D009893 2.6e-06 56.2 42 57.1
TAR636G3050 Trochodendron aralioides HOM05D008098 ORTHO05D009893 2.6e-06 56.2 40 55.0
COL.COLO4_11875 Corchorus olitorius HOM05D008098 ORTHO05D009893 3.3e-06 55.8 59 44.1
Lalb_Chr23g0270681 Lupinus albus HOM05D000562 ORTHO05D000388 4.4e-06 55.5 47 48.9
FAN20G2698 Fragaria x ananassa HOM05D008098 ORTHO05D009893 5.7e-06 55.1 49 46.9
FAN27G1076 Fragaria x ananassa HOM05D008098 ORTHO05D009893 5.7e-06 55.1 49 46.9
CSS0015317 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 7.5e-06 54.7 74 39.2
FAN24G1322 Fragaria x ananassa HOM05D008098 ORTHO05D009893 7.5e-06 54.7 49 46.9
Gohir.D09G220150 Gossypium hirsutum HOM05D008098 ORTHO05D009893 9.7e-06 54.3 40 52.5
Pp3c16_8260 Physcomitrium patens HOM05D000562 ORTHO05D000388 9.7e-06 54.3 42 52.4
RcHm_v2.0_Chr6g0290431 Rosa chinensis HOM05D008098 ORTHO05D009893 9.7e-06 54.3 49 46.9


User provided reference genes

Program Settings