Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.9e-48 195.7 107 100.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 2.7e-47 191.8 107 97.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.9e-45 185.7 107 94.4
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 9.5e-45 183.3 107 93.5
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.8e-43 179.1 107 91.6
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.8e-43 179.1 107 91.6
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.8e-43 179.1 107 91.6
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.8e-43 179.1 107 91.6
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.4e-43 178.7 107 91.6
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 6.8e-43 177.2 107 89.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.8e-42 174.1 107 88.8
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 2.2e-41 172.2 107 88.8
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 4.9e-41 171.0 107 87.9
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 7.1e-40 167.2 107 87.9
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.6e-39 166.0 107 85.0
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.3e-38 162.9 107 86.0
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 5.2e-35 151.0 103 79.6
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.2e-34 149.8 103 77.7
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.0e-34 149.1 105 74.3
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 2.6e-34 148.7 99 77.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 4.4e-34 147.9 104 73.1
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 4.4e-34 147.9 105 74.3
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 7.6e-34 147.1 103 75.7
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 9.9e-34 146.7 105 74.3
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.3e-33 146.4 105 73.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.3e-33 146.4 100 76.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.3e-33 146.4 105 73.3
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 3.8e-33 144.8 105 72.4
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 6.4e-33 144.1 99 75.8
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.1e-32 143.3 103 73.8
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.4e-32 142.1 103 72.8
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.2e-32 141.7 104 70.2
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 3.2e-32 141.7 103 73.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.2e-32 141.4 105 71.4
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 4.2e-32 141.4 100 73.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.2e-32 141.4 97 75.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 5.4e-32 141.0 99 71.7
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 9.3e-32 140.2 102 72.5
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.6e-31 139.4 105 68.6
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.1e-31 139.0 103 71.8
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.1e-31 139.0 105 68.6
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 3.5e-31 138.3 104 69.2
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 100 72.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.6e-31 137.9 103 70.9
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 4.6e-31 137.9 101 71.3
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 6.0e-31 137.5 102 71.6
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 6.0e-31 137.5 105 67.6
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 6.0e-31 137.5 101 70.3
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 7.8e-31 137.1 98 75.5
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.0e-30 136.7 105 65.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.0e-30 136.7 100 73.0
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.0e-30 136.7 99 71.7
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.3e-30 136.3 99 71.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.3e-30 136.3 99 71.7
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.7e-30 136.0 100 72.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 67.6
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 3.0e-30 135.2 99 72.7
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.9e-30 134.8 99 70.7
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.9e-30 134.8 99 71.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 8.7e-30 133.7 98 70.4
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.1e-29 133.3 102 66.7
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.5e-29 132.9 104 67.3
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.5e-29 132.9 99 71.7
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.9e-29 132.5 104 67.3
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 4.3e-29 131.3 102 65.7
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 7.3e-29 130.6 103 68.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.3e-28 129.8 102 65.7
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.3e-28 129.8 99 70.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.8e-28 128.6 100 68.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 6.2e-28 127.5 105 63.8
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 6.2e-28 127.5 101 67.3
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 8.1e-28 127.1 102 67.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.4e-27 126.3 101 64.4
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 98 68.4
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 4.0e-27 124.8 101 66.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.5e-26 122.9 101 65.3
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 101 63.4
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.5e-26 122.9 101 63.4
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 108 62.0
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 2.6e-26 122.1 106 61.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 2.6e-26 122.1 104 64.4
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 2.6e-26 122.1 104 64.4
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 3.4e-26 121.7 101 62.4
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 3.4e-26 121.7 101 61.4
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.4e-26 121.7 100 64.0
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 4.5e-26 121.3 101 62.4
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.8e-26 120.9 116 60.3
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 7.6e-26 120.6 104 63.5
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-25 119.8 99 62.6
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-25 119.8 99 62.6
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.9e-25 118.6 106 60.4
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 4.9e-25 117.9 104 58.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 6.4e-25 117.5 97 62.9
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 8.4e-25 117.1 101 63.4
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 8.4e-25 117.1 101 63.4
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 1.9e-24 115.9 101 60.4
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 2.4e-24 115.5 101 61.4
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 3.2e-24 115.2 74 86.5
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 5.4e-24 114.4 104 59.6
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.2e-23 113.2 80 77.5
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.6e-23 112.8 102 61.8
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.6e-23 112.8 99 61.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 7.9e-23 110.5 80 75.0
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.9e-22 108.2 80 71.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.9e-22 108.2 77 74.0
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 3.9e-22 108.2 80 71.2
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.5e-21 106.3 79 70.9
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 4.3e-21 104.8 156 44.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.6e-20 102.8 80 67.5
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.7e-20 101.7 83 66.3
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.4e-19 99.8 82 64.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 80 66.2
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 2.6e-18 95.5 100 54.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 4.5e-18 94.7 91 53.8
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 7.6e-18 94.0 100 54.0
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 9.9e-18 93.6 91 51.6
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 4.9e-17 91.3 79 62.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 6.4e-17 90.9 76 65.8
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 8.4e-17 90.5 52 88.5
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 8.4e-17 90.5 52 88.5
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 7.1e-16 87.4 76 59.2
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.6e-15 86.3 78 59.0
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 6.0e-15 84.3 94 50.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 3.4e-10 68.6 54 68.5
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.4e-08 63.2 74 47.3
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 5.1e-06 54.7 79 40.5


User provided reference genes

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