Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61930 Arabidopsis thaliana HOM05D010930 ORTHO05D012996 1.5e-56 222.6 110 100.0
AL5G44530 Arabidopsis lyrata HOM05D010930 ORTHO05D012996 4.5e-50 201.1 110 90.9
CARHR172290 Cardamine hirsuta HOM05D010930 ORTHO05D012996 9.2e-43 176.8 111 82.0
Carub.0005s2869 Capsella rubella HOM05D010930 ORTHO05D012996 1.1e-40 169.9 113 80.5
Sp5g01420 Schrenkiella parvula HOM05D010930 ORTHO05D012996 2.5e-32 142.1 111 70.3
Thhalv10006380m.g Eutrema salsugineum HOM05D010930 ORTHO05D012996 1.1e-30 136.7 107 70.1
BcaC07g42620 Brassica carinata HOM05D010930 ORTHO05D012996 1.8e-30 136.0 113 66.4
BcaC07g40688 Brassica carinata HOM05D010930 ORTHO05D012996 5.2e-30 134.4 113 64.6
C08p36860 Brassica napus HOM05D010930 ORTHO05D012996 5.2e-30 134.4 113 64.6
BolC8t51265H Brassica oleracea HOM05D010930 ORTHO05D012996 5.2e-30 134.4 113 64.6
A09p54000 Brassica napus HOM05D010930 ORTHO05D012996 1.3e-28 129.8 113 62.8
BraA09t40814Z Brassica rapa HOM05D010930 ORTHO05D012996 1.3e-28 129.8 113 62.8
BcaC02g10264 Brassica carinata HOM05D010930 ORTHO05D012996 2.9e-28 128.6 112 67.0
C04p30970 Brassica napus HOM05D010930 ORTHO05D012996 2.9e-28 128.6 112 67.0
BolC4t24616H Brassica oleracea HOM05D010930 ORTHO05D012996 2.9e-28 128.6 112 67.0
A04p00840 Brassica napus HOM05D010930 ORTHO05D012996 5.4e-27 124.4 112 66.1
BraA04t15801Z Brassica rapa HOM05D010930 ORTHO05D012996 5.4e-27 124.4 112 66.1
BcaB02g08131 Brassica carinata HOM05D010930 ORTHO05D012996 1.1e-24 116.7 111 64.0
THA.LOC104817614 Tarenaya hassleriana HOM05D010930 ORTHO05D012996 9.9e-13 77.0 110 50.0
Eucgr.H01937 Eucalyptus grandis HOM05D009241 ORTHO05D011050 9.6e-08 60.5 92 41.3
TAR636G1094 Trochodendron aralioides HOM05D009241 ORTHO05D011050 3.1e-06 55.5 85 40.0
Cfa003740 Carpinus fangiana HOM05D009241 ORTHO05D011050 5.3e-06 54.7 82 41.5
Potri.002G179000 Populus trichocarpa HOM05D009241 ORTHO05D011050 5.3e-06 54.7 114 41.2
Eucgr.H01935 Eucalyptus grandis HOM05D009241 ORTHO05D011050 9.0e-06 53.9 109 39.4


User provided reference genes

Program Settings