Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 2.7e-152 542.0 273 100.0
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.5e-147 524.6 273 97.1
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 9.6e-142 506.9 273 92.7
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 4.8e-141 504.6 273 92.3
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.4e-138 494.2 274 92.0
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 8.4e-138 493.8 273 90.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.5e-134 483.0 275 88.7
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.5e-134 483.0 275 88.7
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.1e-121 440.3 273 82.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.1e-121 440.3 273 82.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 4.1e-116 421.8 277 79.8
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.1e-113 413.7 274 79.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 5.1e-111 404.8 279 76.3
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 5.7e-102 374.8 270 70.7
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 3.1e-100 369.0 268 70.5
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 3.5e-99 365.5 223 78.9
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 5.9e-99 364.8 279 67.4
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-98 364.0 270 70.0
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.9e-98 362.5 270 70.0
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 5.0e-98 361.7 266 69.2
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.5e-97 360.1 276 67.4
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.9e-97 359.8 231 77.1
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 2.5e-97 359.4 223 78.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 2.5e-97 359.4 273 69.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 5.5e-97 358.2 275 67.3
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 5.5e-97 358.2 277 67.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 7.2e-97 357.8 273 68.9
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 9.4e-97 357.5 268 68.3
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 9.4e-97 357.5 280 66.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.2e-96 357.1 280 67.9
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 2.7e-96 355.9 273 67.4
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.6e-96 355.5 275 67.3
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 6.1e-96 354.8 229 74.7
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 8.0e-96 354.4 278 67.6
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 8.0e-96 354.4 278 67.6
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 8.0e-96 354.4 223 77.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.4e-95 353.6 279 67.7
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.4e-95 353.6 279 65.6
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.8e-95 353.2 230 73.9
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.8e-95 353.2 279 65.2
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 2.3e-95 352.8 274 68.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 2.3e-95 352.8 258 68.6
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 4.0e-95 352.1 280 65.7
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 4.0e-95 352.1 223 75.3
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 4.0e-95 352.1 256 69.5
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 5.2e-95 351.7 277 65.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 8.8e-95 350.9 277 65.3
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.2e-94 350.5 223 75.8
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.5e-94 350.1 279 67.0
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 3.3e-94 349.0 277 65.0
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 4.4e-94 348.6 279 64.5
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 7.5e-94 347.8 226 74.3
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 7.5e-94 347.8 275 65.1
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.3e-93 347.1 270 65.9
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.3e-93 347.1 232 72.4
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.2e-93 346.3 279 65.6
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.8e-93 345.9 275 64.0
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.7e-93 345.5 224 73.2
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.8e-93 345.1 276 66.3
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 6.3e-93 344.7 295 62.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 8.3e-93 344.4 250 68.4
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.4e-92 343.6 221 73.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.8e-92 343.2 269 65.4
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.8e-92 343.2 249 69.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.8e-92 343.2 226 72.6
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.4e-92 342.8 275 65.8
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.4e-92 342.8 233 71.2
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 5.3e-92 341.7 204 80.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 7.0e-92 341.3 277 63.9
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 9.1e-92 340.9 275 65.1
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 2.7e-91 339.3 281 65.1
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.5e-91 339.0 204 80.4
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.5e-91 339.0 204 80.4
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 7.7e-91 337.8 263 68.4
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 7.7e-91 337.8 304 60.5
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.0e-90 337.4 275 64.0
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.2e-90 336.3 204 78.9
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 2.2e-90 336.3 283 63.6
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 4.2e-89 332.0 280 62.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 5.5e-89 331.6 304 60.5
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 9.4e-89 330.9 227 74.9
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.6e-88 330.1 204 77.0
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 4.7e-88 328.6 204 77.9
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.0e-87 327.4 204 75.5
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 3.0e-87 325.9 232 72.4
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 5.2e-87 325.1 216 75.0
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 8.8e-87 324.3 278 62.6
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 2.0e-86 323.2 274 61.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 2.0e-86 323.2 203 75.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 7.5e-86 321.2 210 75.7
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.8e-84 316.6 268 63.1
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.8e-84 316.6 270 61.5
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.5e-83 312.4 262 61.8
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 5.9e-83 311.6 262 62.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.7e-82 310.1 224 67.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.9e-82 309.3 247 63.6
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 2.9e-82 309.3 218 71.1
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 6.1e-80 301.6 223 67.7
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 3.4e-78 295.8 202 71.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.4e-76 290.4 247 58.3
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.6e-75 287.0 181 76.8
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.9e-74 282.7 264 60.2
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 8.3e-69 264.6 200 66.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.5e-67 259.2 283 55.1
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.2e-64 250.8 226 57.1
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.6e-62 243.0 201 64.2
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 2.2e-61 240.0 222 59.5
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.9e-61 239.6 278 52.2
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.7e-61 239.2 158 74.7
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 5.4e-60 235.3 212 59.9
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.1e-59 233.4 159 70.4
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 6.0e-59 231.9 203 58.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.6e-56 222.6 241 52.3
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 4.7e-56 222.2 232 50.4
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.4e-54 216.1 254 45.7
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.9e-50 202.6 116 80.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.3e-42 177.6 111 77.5
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 4.3e-41 172.6 121 70.2
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.9e-37 159.1 212 45.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.3e-23 112.5 93 58.1
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.0e-22 110.5 187 38.0
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 6.3e-08 62.4 62 56.5
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.4e-07 61.2 44 63.6


User provided reference genes

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