Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 0.0e+00 1262.7 665 100.0
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 0.0e+00 1153.7 666 91.7
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 0.0e+00 1116.3 667 88.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.4e-311 1072.4 669 84.6
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 5.5e-292 1007.3 673 79.8
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 2.1e-291 1005.4 669 80.7
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 2.7e-283 978.4 670 79.3
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 6.8e-282 973.8 671 79.1
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 1.5e-281 972.6 670 78.7
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 7.5e-281 970.3 671 78.8
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.8e-235 818.9 670 66.7
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.1e-231 807.0 672 67.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.1e-223 780.4 548 78.1
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 7.0e-186 654.8 684 56.0
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 7.0e-186 654.8 701 53.4
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 9.1e-186 654.4 700 54.4
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.2e-185 654.1 684 55.4
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 4.5e-185 652.1 694 55.2
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 4.5e-185 652.1 690 56.1
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.9e-184 649.4 693 53.8
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.2e-183 646.0 672 54.9
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 3.2e-183 646.0 679 55.2
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 9.4e-183 644.4 676 54.7
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.6e-182 642.5 684 55.1
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 6.1e-182 641.7 684 54.4
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.3e-181 639.8 684 55.3
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 8.8e-181 637.9 678 54.3
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.5e-180 637.1 679 54.9
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 2.6e-180 636.3 670 53.7
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.3e-179 634.0 680 54.0
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.2e-179 633.3 678 53.8
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 3.7e-179 632.5 682 53.5
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 8.2e-179 631.3 682 53.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.1e-178 630.9 681 53.7
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.4e-178 630.6 684 53.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.4e-178 630.6 684 54.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.4e-178 630.6 695 53.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-177 626.7 684 53.2
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 2.0e-177 626.7 683 53.3
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 3.5e-177 625.9 679 53.3
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.0e-176 624.4 682 53.2
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 8.5e-176 621.3 670 53.6
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.9e-175 620.2 670 52.4
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 4.2e-175 619.0 681 54.8
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 9.4e-175 617.8 682 53.2
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 1.8e-173 613.6 686 53.4
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.0e-172 610.1 671 53.7
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 3.3e-172 609.4 674 51.6
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 1.3e-171 607.4 679 52.9
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.4e-170 604.0 683 51.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 4.1e-170 602.4 679 53.6
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 4.1e-170 602.4 680 52.8
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 5.3e-170 602.1 673 52.3
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.0e-170 601.7 685 52.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 2.2e-168 596.7 672 53.0
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 3.8e-168 595.9 685 51.8
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.1e-167 594.3 681 50.8
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.1e-167 594.3 681 50.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.5e-167 594.0 676 51.6
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 7.2e-167 591.7 683 51.4
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 7.2e-167 591.7 682 50.9
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.2e-166 590.9 677 51.7
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 1.6e-166 590.5 676 51.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 3.6e-166 589.3 674 52.2
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 3.6e-166 589.3 682 50.9
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 4.7e-166 589.0 678 49.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 6.1e-166 588.6 682 51.9
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 8.0e-166 588.2 680 52.2
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 8.0e-166 588.2 676 51.3
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 8.0e-166 588.2 687 50.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 1.0e-165 587.8 678 50.1
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.4e-165 587.4 678 50.1
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 6.8e-165 585.1 685 51.1
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.2e-164 584.3 686 50.0
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 3.4e-164 582.8 684 51.3
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 4.4e-164 582.4 680 49.7
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 7.5e-164 581.6 673 51.3
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 1.7e-163 580.5 685 50.7
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 3.1e-162 576.2 674 50.1
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.1e-162 576.2 678 51.8
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 8.6e-160 568.2 665 50.2
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 1.1e-159 567.8 655 51.0
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 9.5e-159 564.7 659 50.7
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.6e-158 563.9 673 51.0
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 2.1e-158 563.5 661 50.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.6e-156 556.6 629 51.4
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.3e-155 554.3 665 49.8
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 9.2e-154 548.1 610 53.8
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 7.8e-153 545.0 674 47.0
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.6e-150 537.3 681 48.3
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.4e-149 534.3 481 58.0
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.3e-149 533.5 678 47.5
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.4e-148 529.6 671 48.7
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 3.7e-147 526.2 665 50.1
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 5.4e-146 522.3 677 47.4
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 7.0e-146 521.9 321 84.1
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.0e-144 518.1 673 47.1
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.0e-144 518.1 674 46.9
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 7.3e-143 511.9 684 46.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 7.3e-143 511.9 663 48.0
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.5e-140 504.2 638 49.1
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 6.9e-117 425.6 693 39.7
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.7e-115 421.0 691 37.5
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.2e-115 420.6 692 40.3
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 7.8e-113 412.1 307 69.7
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.4e-106 391.3 344 61.0
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.4e-98 364.8 673 35.8
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.1e-95 355.1 365 53.2
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.5e-95 354.8 624 38.5
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.3e-94 351.7 342 56.7
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 7.6e-92 342.4 241 78.0
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 9.4e-82 308.9 683 35.0
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.6e-81 308.1 316 58.9
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 2.8e-78 297.4 246 68.3
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 5.3e-77 293.1 609 33.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 8.3e-54 216.1 248 51.2
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 9.5e-34 149.4 252 40.5
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 4.6e-20 104.0 165 45.5
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.9e-18 98.6 183 39.3
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-16 92.8 114 46.5
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 9.9e-15 86.3 184 33.7
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.1e-12 78.6 87 50.6
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 7.3e-10 70.1 172 32.6


User provided reference genes

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