Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 3.6e-38 161.0 77 100.0
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 1.8e-32 142.1 74 86.5
Carub.0005s2785 Capsella rubella HOM05D007747 ORTHO05D014853 3.0e-24 114.8 74 70.3
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 4.5e-12 74.3 74 51.4
BcaB06g29617 Brassica carinata HOM05D016272 ORTHO05D014853 5.9e-12 73.9 77 50.6
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.9e-11 71.6 77 50.6
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.4e-10 69.3 76 51.3
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.4e-10 69.3 79 49.4
BcaB06g28203 Brassica carinata HOM05D007747 ORTHO05D024130 1.4e-10 69.3 77 46.8
Carub.0001s3631 Capsella rubella HOM05D007747 ORTHO05D014853 1.4e-10 69.3 76 48.7
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 1.9e-10 68.9 77 49.4
C04p55800 Brassica napus HOM05D016272 ORTHO05D014853 4.2e-10 67.8 77 46.8
A04p20110 Brassica napus HOM05D016272 ORTHO05D014853 7.2e-10 67.0 77 46.8
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-09 66.2 74 50.0
C04p55820 Brassica napus HOM05D016272 ORTHO05D014853 1.2e-09 66.2 74 45.9
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 1.2e-09 66.2 75 49.3
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 1.2e-09 66.2 77 49.4
A04p20120 Brassica napus HOM05D016272 ORTHO05D014853 2.1e-09 65.5 77 45.5
BolC4t27109H Brassica oleracea HOM05D016272 ORTHO05D014853 2.1e-09 65.5 74 45.9
A07p18970 Brassica napus HOM05D007747 ORTHO05D024130 3.6e-09 64.7 86 43.0
BraA07t29602Z Brassica rapa HOM05D007747 ORTHO05D024130 3.6e-09 64.7 86 43.0
BolC4t23792H Brassica oleracea HOM05D007747 ORTHO05D024130 4.6e-09 64.3 86 41.9
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 6.1e-09 63.9 77 48.1
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 6.1e-09 63.9 77 48.1
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 7.9e-09 63.5 74 50.0
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 1.0e-08 63.2 74 47.3
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.4e-08 62.8 78 48.7
BolC4t27108H Brassica oleracea HOM05D016272 ORTHO05D014853 1.4e-08 62.8 77 44.2
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 1.4e-08 62.8 77 50.6
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.8e-08 62.4 79 46.8
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 2.3e-08 62.0 74 48.6
C04p22980 Brassica napus HOM05D007747 ORTHO05D024130 2.3e-08 62.0 86 40.7
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 3.9e-08 61.2 77 46.8
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 5.1e-08 60.8 77 45.5
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 5.1e-08 60.8 77 45.5
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 6.7e-08 60.5 80 47.5
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 8.8e-08 60.1 78 46.2
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 8.8e-08 60.1 77 46.8
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 1.5e-07 59.3 79 48.1
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 1.5e-07 59.3 75 46.7
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.6e-07 58.5 78 41.0
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 3.3e-07 58.2 79 48.1
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 3.3e-07 58.2 79 48.1
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 4.4e-07 57.8 79 48.1
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 5.7e-07 57.4 77 45.5
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 5.7e-07 57.4 79 44.3
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 7.4e-07 57.0 77 46.8
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 7.4e-07 57.0 75 42.7
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 7.4e-07 57.0 78 43.6
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 9.7e-07 56.6 78 48.7
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 2.2e-06 55.5 77 44.2
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 2.2e-06 55.5 77 44.2
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 2.8e-06 55.1 79 45.6
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 3.7e-06 54.7 77 44.2
Carub.0005s0920 Capsella rubella HOM05D007747 ORTHO05D009997 3.7e-06 54.7 68 44.1
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 4.8e-06 54.3 77 44.2
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 4.8e-06 54.3 78 41.0
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 6.3e-06 53.9 77 44.2
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 6.3e-06 53.9 77 44.2
AT4G09795 Arabidopsis thaliana HOM05D007747 ORTHO05D023629 8.2e-06 53.5 81 44.4
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 8.2e-06 53.5 81 43.2
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 8.2e-06 53.5 77 44.2
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 8.2e-06 53.5 81 43.2


User provided reference genes

Program Settings