Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 2.7e-38 161.4 75 100.0
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 1.9e-31 138.7 75 80.0
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 4.7e-30 134.0 75 78.7
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 7.9e-30 133.3 75 76.0
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 3.9e-29 131.0 75 76.0
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 8.8e-29 129.8 75 74.7
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 8.8e-29 129.8 75 74.7
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 2.5e-23 111.7 72 66.7
CARHR286760 Cardamine hirsuta HOM05D009342 ORTHO05D009997 8.0e-22 106.7 72 63.9
AL5G43410 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 3.0e-21 104.8 55 87.3
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.0e-13 78.2 73 46.6
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 4.4e-12 74.3 64 46.9
THA.LOC109116624 Tarenaya hassleriana HOM05D013401 ORTHO05D009997 7.5e-12 73.6 68 39.7
BcaB03g15568 Brassica carinata HOM05D007747 ORTHO05D009997 3.7e-11 71.2 74 43.2
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 3.7e-11 71.2 74 40.5
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 6.3e-11 70.5 69 43.5
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 6.3e-11 70.5 76 46.1
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.1e-10 69.7 77 45.5
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.1e-10 69.7 69 44.9
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 1.4e-10 69.3 74 39.2
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 1.4e-10 69.3 74 39.2
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 1.8e-10 68.9 74 39.2
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 3.1e-10 68.2 73 43.8
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 4.1e-10 67.8 78 47.4
THA.LOC104815826 Tarenaya hassleriana HOM05D013401 ORTHO05D009997 4.1e-10 67.8 73 35.6
AL807U10010 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 5.3e-10 67.4 75 41.3
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 5.3e-10 67.4 73 41.1
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.0e-09 65.5 69 42.0
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 2.7e-09 65.1 74 40.5
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 1.3e-08 62.8 61 41.0
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.2e-08 62.0 76 40.8
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 2.9e-08 61.6 58 41.4
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 2.9e-08 61.6 58 41.4
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 2.9e-08 61.6 79 38.0
AT3G20997 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 5.0e-08 60.8 75 37.3
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 5.0e-08 60.8 74 36.5
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 1.5e-07 59.3 74 35.1
A07p30920 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-07 59.3 74 37.8
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 1.5e-07 59.3 74 35.1
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 1.5e-07 59.3 74 35.1
Carub.0004s1017 Capsella rubella HOM05D009342 ORTHO05D009997 2.5e-07 58.5 74 37.8
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 3.2e-07 58.2 77 39.0
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 7.2e-07 57.0 74 33.8
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 9.4e-07 56.6 75 42.7
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 2.1e-06 55.5 70 40.0
C04p55800 Brassica napus HOM05D016272 ORTHO05D014853 2.7e-06 55.1 68 38.2
C04p55820 Brassica napus HOM05D016272 ORTHO05D014853 2.7e-06 55.1 68 38.2
A04p20110 Brassica napus HOM05D016272 ORTHO05D014853 3.6e-06 54.7 68 39.7
A04p20120 Brassica napus HOM05D016272 ORTHO05D014853 4.7e-06 54.3 68 38.2
BolC4t27109H Brassica oleracea HOM05D016272 ORTHO05D014853 4.7e-06 54.3 68 38.2


User provided reference genes

Program Settings