Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 4.0e-195 684.5 327 100.0
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 3.8e-185 651.4 327 95.1
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.1e-176 623.2 327 91.7
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.2e-176 621.3 327 91.4
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 7.1e-176 620.5 327 91.7
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 8.7e-174 613.6 327 90.5
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 2.2e-172 609.0 325 89.8
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 9.0e-171 603.6 332 88.3
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 9.0e-171 603.6 332 88.3
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 3.4e-170 601.7 325 89.5
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 5.0e-169 597.8 332 87.0
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 2.5e-168 595.5 325 87.7
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.2e-167 593.2 332 86.1
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 3.2e-160 568.5 327 82.3
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.8e-156 555.4 309 82.8
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.9e-153 545.4 322 80.1
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 7.2e-152 540.8 332 78.3
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.6e-151 539.7 308 82.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.6e-151 539.7 327 77.7
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.7e-151 538.9 323 79.3
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.4e-150 536.6 327 77.7
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.8e-150 536.2 325 77.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.3e-150 535.8 325 77.8
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 2.3e-150 535.8 323 78.0
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 3.0e-150 535.4 325 77.5
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 5.2e-150 534.6 325 76.9
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 5.2e-150 534.6 302 81.8
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 6.7e-150 534.3 326 77.3
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 8.8e-150 533.9 298 82.9
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 4.4e-149 531.6 328 75.9
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 5.7e-149 531.2 295 82.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 5.7e-149 531.2 298 81.9
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 9.7e-149 530.4 327 76.5
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 9.7e-149 530.4 325 76.0
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.3e-148 530.0 297 80.8
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.3e-148 530.0 329 76.0
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.7e-148 529.6 327 75.8
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.7e-148 529.6 327 76.5
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.7e-148 529.6 306 79.1
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.2e-148 529.3 304 80.3
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 2.8e-148 528.9 319 77.1
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 3.7e-148 528.5 327 75.8
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.7e-148 528.5 327 75.8
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.7e-148 528.5 327 75.8
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 3.7e-148 528.5 323 76.2
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-147 526.9 327 75.5
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.4e-147 526.6 327 76.1
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.8e-147 526.2 295 82.7
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.8e-147 526.2 300 82.0
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-147 525.8 327 75.5
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.1e-147 525.4 300 79.3
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 4.1e-147 525.0 323 76.8
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 5.3e-147 524.6 323 76.2
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 9.1e-147 523.9 309 78.6
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.5e-146 521.9 318 76.7
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.5e-146 521.5 302 78.8
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 4.5e-146 521.5 320 75.6
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 5.9e-146 521.2 308 78.6
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 7.7e-146 520.8 331 74.9
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.3e-145 520.0 308 77.3
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.3e-145 520.0 302 78.5
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.9e-145 518.8 298 80.2
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 2.9e-145 518.8 310 78.4
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 5.0e-145 518.1 331 74.3
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 6.5e-145 517.7 308 76.9
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 3.2e-144 515.4 323 75.9
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 5.5e-144 514.6 322 76.1
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.2e-144 514.2 329 74.8
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.6e-143 511.9 302 79.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.3e-142 509.2 305 78.0
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 7.5e-141 504.2 306 76.1
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 2.2e-140 502.7 298 77.5
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 8.3e-140 500.7 321 72.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.1e-139 500.4 313 75.4
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.6e-138 496.5 295 76.9
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.8e-137 491.9 333 70.0
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 4.2e-136 488.4 339 69.9
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 4.0e-134 481.9 299 73.9
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 4.5e-130 468.4 280 78.6
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.1e-123 447.2 283 74.9
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 2.4e-123 446.0 265 77.7
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.3e-121 440.3 252 79.0
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.7e-121 439.9 274 73.4
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 2.3e-121 439.5 313 68.7
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 5.6e-120 434.9 295 68.5
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 3.6e-119 432.2 241 81.7
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 8.0e-119 431.0 241 81.7
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.2e-117 427.2 292 67.5
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.5e-117 426.8 263 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 9.8e-117 424.1 291 65.6
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.7e-116 422.2 241 79.7
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.2e-114 417.2 264 75.8
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 3.5e-114 415.6 332 59.9
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.1e-112 410.6 293 64.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.3e-110 402.9 291 64.3
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.7e-108 396.7 255 73.7
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 5.1e-105 385.2 247 74.5
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 8.6e-97 357.8 204 78.9
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.2e-93 347.4 208 77.4
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.4e-91 340.5 182 84.1
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.9e-89 332.4 255 63.5
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.4e-86 323.9 239 66.1
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 4.3e-72 275.8 320 48.1
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 4.0e-70 269.2 179 69.3
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 3.2e-67 259.6 188 68.6
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.6e-66 257.3 255 50.6
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 3.8e-60 236.1 138 81.2
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 8.4e-60 235.0 138 80.4
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.7e-56 221.5 196 58.7
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.4e-54 216.9 301 40.9
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 1.0e-44 184.9 179 58.1
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.9e-44 183.3 145 64.8
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.5e-43 179.1 275 36.0
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 2.7e-42 176.8 280 39.6
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.4e-40 169.5 127 66.9
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.1e-34 149.1 277 33.2
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.6e-29 133.7 345 29.6
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.6e-26 124.4 157 42.7
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 8.5e-20 102.1 61 77.0
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.2e-19 100.1 81 63.0
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 8.3e-15 85.5 57 70.2
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.2e-11 73.2 41 78.0
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.6e-11 72.8 54 57.4
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.3e-09 67.4 42 71.4


User provided reference genes

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