Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G60070 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 7.3e-259 896.7 459 100.0
AL5G42260 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 9.8e-256 886.3 460 98.9
Carub.0005s2680 Capsella rubella HOM05D004544 ORTHO05D005504 4.3e-251 870.9 459 96.7
Thhalv10005961m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 6.2e-250 867.1 459 97.2
BcaC02g10108 Brassica carinata HOM05D004544 ORTHO05D005504 3.0e-244 848.2 460 94.1
BolC4t24833H Brassica oleracea HOM05D004544 ORTHO05D005504 2.5e-243 845.1 461 94.1
BraA04t15912Z Brassica rapa HOM05D004544 ORTHO05D005504 2.5e-243 845.1 460 93.9
C04p32650 Brassica napus HOM05D004544 ORTHO05D005504 4.3e-243 844.3 460 93.9
A04p01890 Brassica napus HOM05D004544 ORTHO05D005504 9.5e-243 843.2 460 94.1
BcaB02g08195 Brassica carinata HOM05D004544 ORTHO05D005504 1.6e-242 842.4 460 93.5
Sp5g03140 Schrenkiella parvula HOM05D004544 ORTHO05D005504 5.8e-240 833.9 459 93.2
Sp4g26350 Schrenkiella parvula HOM05D004544 ORTHO05D005504 3.5e-221 771.5 460 85.4
Aa31LG10G14230 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.3e-220 769.6 458 86.9
CARHR139460 Cardamine hirsuta HOM05D004544 ORTHO05D005504 3.9e-220 768.1 457 85.8
Thhalv10001436m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 6.6e-220 767.3 460 85.2
AT2G44280 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 4.8e-218 761.1 454 85.2
Carub.0004s2687 Capsella rubella HOM05D004544 ORTHO05D005504 8.1e-218 760.4 452 85.4
AL4G43240 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 1.8e-217 759.2 454 85.0
BcaNung06603 Brassica carinata HOM05D004544 ORTHO05D005504 3.1e-217 758.4 460 84.1
BolC4t22159H Brassica oleracea HOM05D004544 ORTHO05D005504 3.1e-217 758.4 460 84.1
BraA05t19424Z Brassica rapa HOM05D004544 ORTHO05D005504 5.3e-217 757.7 460 84.1
BcaB02g08807 Brassica carinata HOM05D004544 ORTHO05D005504 9.0e-217 756.9 460 84.1
A05p04480 Brassica napus HOM05D004544 ORTHO05D005504 2.0e-216 755.7 460 83.7
C04p05190 Brassica napus HOM05D004544 ORTHO05D005504 5.8e-216 754.2 460 84.1
BolC4t28598H Brassica oleracea HOM05D004544 ORTHO05D005504 1.2e-213 746.5 459 82.4
A04p33250 Brassica napus HOM05D004544 ORTHO05D005504 2.1e-213 745.7 459 82.6
BraA04t18786Z Brassica rapa HOM05D004544 ORTHO05D005504 2.1e-213 745.7 459 82.6
Aa31LG1G25900 Aethionema arabicum HOM05D004544 ORTHO05D005504 5.1e-212 741.1 481 80.5
THA.LOC104817137 Tarenaya hassleriana HOM05D004544 ORTHO05D005504 7.4e-211 737.3 455 83.5
C04p70950 Brassica napus HOM05D004544 ORTHO05D005504 2.1e-210 735.7 487 78.2
BcaB06g29367 Brassica carinata HOM05D004544 ORTHO05D005504 4.8e-202 708.0 480 77.1
Atru.chr12.1432 Acer truncatum HOM05D004544 ORTHO05D005504 7.6e-192 674.1 454 74.2
Duzib068G1099 Durio zibethinus HOM05D004544 ORTHO05D005504 1.6e-186 656.4 459 73.2
CiPaw.13G000600 Carya illinoinensis HOM05D004544 ORTHO05D005504 2.2e-186 656.0 454 72.2
Thecc.08G193200 Theobroma cacao HOM05D004544 ORTHO05D005504 1.8e-185 652.9 459 73.6
Ciclev10031412m.g Citrus clementina HOM05D004544 ORTHO05D005504 4.5e-184 648.3 466 69.5
Eucgr.E04336 Eucalyptus grandis HOM05D004544 ORTHO05D005504 2.2e-183 646.0 454 69.8
TWI09G1596 Tripterygium wilfordii HOM05D004544 ORTHO05D005504 6.5e-183 644.4 459 70.6
Gohir.D08G037000 Gossypium hirsutum HOM05D004544 ORTHO05D005504 2.5e-182 642.5 459 71.5
Gorai.004G035000 Gossypium raimondii HOM05D004544 ORTHO05D005504 2.5e-182 642.5 459 71.5
RcHm_v2.0_Chr1g0313141 Rosa chinensis HOM05D004544 ORTHO05D005504 2.5e-182 642.5 457 70.7
Cfa010700 Carpinus fangiana HOM05D004544 ORTHO05D005504 4.2e-182 641.7 454 71.8
Potri.009G024600 Populus trichocarpa HOM05D004544 ORTHO05D005504 4.2e-182 641.7 454 70.3
Cpa.g.c29747 Carica papaya HOM05D004544 ORTHO05D005504 9.4e-182 640.6 391 81.6
Potri.001G232100 Populus trichocarpa HOM05D004544 ORTHO05D005504 7.9e-181 637.5 454 70.3
FvH4_c5g00010 Fragaria vesca HOM05D004544 ORTHO05D005504 2.3e-180 636.0 457 70.2
Lalb_Chr25g0283741 Lupinus albus HOM05D004544 ORTHO05D005504 1.1e-179 633.6 450 72.2
CANSAT11G0055 Cannabis sativa HOM05D004544 ORTHO05D005504 2.0e-179 632.9 457 70.5
FAN01G0284 Fragaria x ananassa HOM05D004544 ORTHO05D005504 2.0e-179 632.9 457 69.8
PGR031G1320 Punica granatum HOM05D004544 ORTHO05D005504 4.4e-179 631.7 459 68.8
Lj3g0003623 Lotus japonicus HOM05D004544 ORTHO05D005504 2.8e-178 629.0 448 71.9
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea HOM05D004544 ORTHO05D005504 3.7e-178 628.6 476 68.7
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea HOM05D004544 ORTHO05D005504 6.3e-178 627.9 476 68.7
Glyma.15G267700 Glycine max HOM05D004544 ORTHO05D005504 1.2e-176 623.6 447 71.1
Glyma.08G158600 Glycine max HOM05D004544 ORTHO05D005504 1.5e-176 623.2 447 71.4
MD02G1320400 Malus domestica HOM05D004544 ORTHO05D005504 2.6e-176 622.5 450 71.1
Medtr2g062270 Medicago truncatula HOM05D004544 ORTHO05D005504 4.5e-176 621.7 448 69.6
GSVIVG01001349001 Vitis vinifera HOM05D004544 ORTHO05D005504 6.5e-175 617.8 457 68.7
Rhsim07G0049300 Rhododendron simsii HOM05D004544 ORTHO05D005504 4.2e-174 615.1 452 68.8
CsaV3_7G031530 Cucumis sativus L. HOM05D004544 ORTHO05D005504 5.5e-174 614.8 451 68.7
TAR633G2617 Trochodendron aralioides HOM05D004544 ORTHO05D005504 2.1e-173 612.8 453 68.4
VMungo1080G0174 Vigna mungo HOM05D004544 ORTHO05D005504 3.6e-173 612.1 447 69.6
Ca_03221_v3 Cicer arietinum L. HOM05D004544 ORTHO05D005504 6.1e-173 611.3 447 68.2
Phvul.005G042600 Phaseolus vulgaris HOM05D004544 ORTHO05D005504 6.1e-173 611.3 447 69.8
Aqoxy1G00422 Aquilegia oxysepala HOM05D004544 ORTHO05D005504 3.0e-172 609.0 457 66.5
TPR.G16160 Trifolium pratense HOM05D004544 ORTHO05D005504 3.9e-172 608.6 448 68.1
EL10Ac1g02232 Beta vulgaris HOM05D004544 ORTHO05D005504 1.1e-171 607.1 448 66.7
EL10Ac1g02233 Beta vulgaris HOM05D004544 ORTHO05D005504 1.1e-171 607.1 448 66.7
CSS0044763 Camellia sinensis var. sinensis HOM05D004544 ORTHO05D005504 1.5e-171 606.7 456 66.4
Solyc01g073660.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 3.3e-171 605.5 459 65.6
Sopen01g033220 Solanum pennellii HOM05D004544 ORTHO05D005504 3.3e-171 605.5 459 65.6
Actinidia05839 Actinidia chinensis HOM05D004544 ORTHO05D005504 7.4e-171 604.4 452 68.1
CAN.G1361.5 Capsicum annuum HOM05D004544 ORTHO05D005504 7.4e-171 604.4 453 66.0
PSO170G0355 Papaver somniferum HOM05D004544 ORTHO05D005504 1.3e-170 603.6 456 68.0
Cc02_g26820 Coffea canephora HOM05D004544 ORTHO05D005504 3.7e-170 602.1 452 68.1
AUR62035404 Chenopodium quinoa HOM05D004544 ORTHO05D005504 4.8e-170 601.7 454 66.3
Dinv43503 Davidia involucrata HOM05D004544 ORTHO05D005504 8.2e-170 600.9 452 67.5
Gohir.A08G026600 Gossypium hirsutum HOM05D004544 ORTHO05D005504 8.2e-170 600.9 459 67.8
Nn7g35919 Nelumbo nucifera HOM05D004544 ORTHO05D005504 4.1e-169 598.6 457 67.4
MBI01_g14445_MAGBIO Magnolia biondii HOM05D004544 ORTHO05D005504 5.3e-169 598.2 462 66.7
Oeu060709.1 Olea europaea HOM05D004544 ORTHO05D005504 5.3e-169 598.2 452 67.5
PSO063G0048 Papaver somniferum HOM05D004544 ORTHO05D005504 5.3e-169 598.2 456 67.5
ClCG09G003650 Citrullus lanatus HOM05D004544 ORTHO05D005504 1.6e-168 596.7 493 63.1
Psat1g129360 Pisum sativum HOM05D004544 ORTHO05D005504 1.6e-168 596.7 448 67.9
vmacro22467 Vaccinium macrocarpon HOM05D004544 ORTHO05D005504 7.7e-168 594.3 468 65.6
Manes.10G153000 Manihot esculenta HOM05D004544 ORTHO05D005504 5.0e-167 591.7 386 76.7
Sed0009480 Sechium edule HOM05D004544 ORTHO05D005504 8.5e-167 590.9 451 65.9
Nn2g15791 Nelumbo nucifera HOM05D004544 ORTHO05D005504 5.5e-166 588.2 455 66.8
Sc03g0003850 Simmondsia chinensis HOM05D004544 ORTHO05D005504 1.2e-165 587.0 452 67.0
DCAR_024995 Daucus carota HOM05D004544 ORTHO05D005504 6.1e-165 584.7 459 67.1
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla HOM05D004544 ORTHO05D005504 8.0e-165 584.3 428 67.5
SGA_v2.0_scaffold260G45890 Striga asiatica HOM05D004544 ORTHO05D005504 4.0e-164 582.0 485 61.4
Nn2g15790 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.2e-163 580.5 444 67.1
ECA236G1315 Erigeron canadensis HOM05D004544 ORTHO05D005504 8.2e-162 574.3 449 64.4
HanXRQChr04g0117441 Helianthus annuus HOM05D004544 ORTHO05D005504 9.1e-161 570.9 449 63.9
unitig_749.g13487 Utricularia gibba HOM05D004544 ORTHO05D005504 1.2e-160 570.5 461 61.8
SalBow5G3691 Salvia bowleyana HOM05D004544 ORTHO05D005504 1.3e-159 567.0 473 62.4
CDE04G3336 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 8.5e-159 564.3 448 65.4
PGSC0003DMG400031131 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.5e-158 563.5 459 62.5
HPP92_012523 Vanilla planifolia HOM05D004544 ORTHO05D005504 5.5e-158 561.6 443 63.4
TAR633G0112 Trochodendron aralioides HOM05D004544 ORTHO05D005504 2.7e-157 559.3 421 68.9
AUR62041888 Chenopodium quinoa HOM05D004544 ORTHO05D005504 4.7e-157 558.5 549 54.5
Peaxi162Scf00402g00941 Petunia axillaris HOM05D004544 ORTHO05D005504 8.8e-156 554.3 453 61.8
Lsat_1_v5_gn_7_33840 Lactuca sativa HOM05D004544 ORTHO05D005504 2.8e-154 549.3 391 67.8
Haze_03276 Corylus avellana HOM05D004544 ORTHO05D005504 7.0e-153 544.7 395 68.9
ATR0001G054 Amborella trichopoda HOM05D004544 ORTHO05D005504 1.3e-151 540.4 396 67.9
Os07g0578200 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 5.0e-151 538.5 457 60.4
CDE05G1716 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 8.5e-151 537.7 478 58.2
Zm00001eb325500 Zea mays HOM05D004544 ORTHO05D005504 8.0e-149 531.2 474 58.2
Os03g0168000 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 2.3e-148 529.6 446 59.2
CARHR170380 Cardamine hirsuta HOM05D004544 ORTHO05D005504 4.5e-144 515.4 290 91.4
Zm00001eb402450 Zea mays HOM05D004544 ORTHO05D005504 2.9e-143 512.7 445 57.8
Nitab4.5_0000468g0180 Nicotiana tabacum HOM05D004544 ORTHO05D005504 4.7e-141 505.4 404 62.1
Peaxi162Scf00245g00710 Petunia axillaris HOM05D004544 ORTHO05D005504 8.3e-138 494.6 453 56.3
Mapoly0020s0019 Marchantia polymorpha HOM05D004544 ORTHO05D005504 5.9e-136 488.4 447 57.7
Nitab4.5_0004502g0040 Nicotiana tabacum HOM05D004544 ORTHO05D005504 7.8e-136 488.0 383 62.9
CAN.G928.1 Capsicum annuum HOM05D004544 ORTHO05D005504 4.3e-134 482.3 432 56.2
Sopen10g026790 Solanum pennellii HOM05D004544 ORTHO05D005504 6.2e-133 478.4 447 54.1
FAN01G3148 Fragaria x ananassa HOM05D004544 ORTHO05D005504 6.8e-132 474.9 354 67.8
Pp3c17_11410 Physcomitrium patens HOM05D004544 ORTHO05D005504 1.7e-130 470.3 447 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis HOM05D004544 ORTHO05D005504 7.0e-129 464.9 454 51.3
CAN.G1361.4 Capsicum annuum HOM05D004544 ORTHO05D005504 1.4e-124 450.7 455 50.8
SMO353G0186 Selaginella moellendorffii HOM05D004544 ORTHO05D005504 1.7e-122 443.7 398 56.8
Sopen01g033230 Solanum pennellii HOM05D004544 ORTHO05D005504 2.4e-121 439.9 458 49.6
Solyc01g073670.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 5.4e-121 438.7 458 49.3
FAN01G0042 Fragaria x ananassa HOM05D004544 ORTHO05D005504 9.2e-121 438.0 446 56.1
Atru.chr11.2714 Acer truncatum HOM05D004544 ORTHO05D005504 6.0e-120 435.3 450 54.4
QL04p001964 Quercus lobata HOM05D004544 ORTHO05D005504 2.8e-117 426.4 278 73.7
Peaxi162Scf00402g00940 Petunia axillaris HOM05D004544 ORTHO05D005504 6.8e-116 421.8 452 48.5
Prupe.2G001700 Prunus persica HOM05D004544 ORTHO05D005504 1.9e-110 403.7 320 65.6
PGSC0003DMG400007701 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.8e-101 373.2 450 45.6
SEGI_30614 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 4.2e-97 359.4 255 69.4
PGSC0003DMG400023279 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.8e-95 354.0 391 50.1
FAN06G4582 Fragaria x ananassa HOM05D004544 ORTHO05D005504 4.2e-89 332.8 269 62.8
PGSC0003DMG400028978 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.9e-81 307.4 454 39.2
Sabra09G0016300 Salix brachista HOM05D004544 ORTHO05D005504 8.2e-77 292.0 317 53.0
MELO3C023501.2 Cucumis melo HOM05D004544 ORTHO05D005504 1.9e-70 270.8 450 39.8
Zm00001eb107640 Zea mays HOM05D004544 ORTHO05D005504 2.8e-69 266.9 195 66.2
QL04p001975 Quercus lobata HOM05D004544 ORTHO05D005504 3.4e-59 233.4 178 68.0
Migut.B01408 Erythranthe guttata HOM05D004544 ORTHO05D005504 3.2e-57 226.9 158 71.5
Migut.B01407 Erythranthe guttata HOM05D004544 ORTHO05D005504 8.2e-53 212.2 129 76.0
Actinidia31716 Actinidia chinensis HOM05D004544 ORTHO05D005504 3.0e-47 193.7 155 61.3
SEGI_18579 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 5.2e-47 193.0 193 52.8
MELO3C000237.2 Cucumis melo HOM05D004544 ORTHO05D005504 2.0e-38 164.5 121 67.8
Psat2g024040 Pisum sativum HOM05D004544 ORTHO05D005504 4.4e-38 163.3 180 48.9
Solyc01g089990.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 8.9e-31 139.0 94 70.2
Migut.B01409 Erythranthe guttata HOM05D004544 ORTHO05D005504 1.0e-26 125.6 134 52.2
Actinidia31717 Actinidia chinensis HOM05D004544 ORTHO05D005504 1.7e-26 124.8 120 59.2
Lj7A562T25 Lonicera japonica HOM05D004544 ORTHO05D005504 5.0e-26 123.2 112 54.5
Hund18992 Selenicereus undatus HOM05D004544 ORTHO05D005504 5.6e-25 119.8 76 69.7
QL04p001512 Quercus lobata HOM05D004544 ORTHO05D001929 8.9e-23 112.5 82 67.1
Os06g0628032 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 9.8e-22 109.0 99 51.5
Glyma.20G091501 Glycine max HOM05D004544 ORTHO05D005504 1.8e-15 88.2 59 76.3
QL04p001505 Quercus lobata HOM05D004544 ORTHO05D005504 1.3e-13 82.0 58 67.2
CAN.G913.7 Capsicum annuum HOM05D004544 ORTHO05D005504 1.2e-11 75.5 63 57.1
Haze_14723 Corylus avellana HOM05D004544 ORTHO05D005504 3.5e-11 73.9 77 57.1
Nitab4.5_0006570g0020 Nicotiana tabacum HOM05D004544 ORTHO05D005504 8.1e-08 62.8 42 71.4


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