Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 8.0e-67 256.9 126 100.0
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 1.7e-56 222.6 126 87.3
Sp5g03270 Schrenkiella parvula HOM05D007257 ORTHO05D008924 1.0e-53 213.4 126 84.9
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.1e-52 209.9 125 80.8
A09p52160 Brassica napus HOM05D007257 ORTHO05D008924 5.8e-49 197.6 126 78.6
BraA09t40647Z Brassica rapa HOM05D007257 ORTHO05D008924 5.8e-49 197.6 126 78.6
BcaC07g40552 Brassica carinata HOM05D007257 ORTHO05D008924 9.8e-49 196.8 126 77.8
C08p34830 Brassica napus HOM05D007257 ORTHO05D008924 9.8e-49 196.8 126 77.8
BcaC07g40438 Brassica carinata HOM05D007257 ORTHO05D008924 2.9e-48 195.3 126 78.6
BolC8t51085H Brassica oleracea HOM05D007257 ORTHO05D008924 3.7e-48 194.9 126 77.0
Thhalv10006503m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 3.2e-47 191.8 129 78.3
Carub.0005s2662 Capsella rubella HOM05D007257 ORTHO05D008924 2.7e-46 188.7 124 81.5
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 2.2e-24 115.9 128 57.8
AL4G42890 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 3.2e-23 112.1 127 54.3
Sp4g26100 Schrenkiella parvula HOM05D007257 ORTHO05D008924 4.2e-23 111.7 126 55.6
Thhalv10001750m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 7.1e-23 110.9 126 50.0
CARHR139190 Cardamine hirsuta HOM05D007257 ORTHO05D008924 2.7e-22 109.0 126 51.6
AT2G44010 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 4.6e-22 108.2 127 54.3
BolC4t22123H Brassica oleracea HOM05D007257 ORTHO05D008924 4.6e-22 108.2 126 48.4
BcaC02g12345 Brassica carinata HOM05D007257 ORTHO05D008924 6.0e-22 107.8 126 48.4
C04p04930 Brassica napus HOM05D007257 ORTHO05D008924 1.0e-21 107.1 126 50.0
A05p04160 Brassica napus HOM05D007257 ORTHO05D008924 3.9e-21 105.1 126 48.4
BraA05t19402Z Brassica rapa HOM05D007257 ORTHO05D008924 3.9e-21 105.1 126 48.4
Carub.0004s2657 Capsella rubella HOM05D007257 ORTHO05D008924 2.5e-20 102.4 126 49.2
BcaB02g08925 Brassica carinata HOM05D007257 ORTHO05D008924 9.6e-20 100.5 126 46.8
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 5.8e-17 91.3 123 46.3
Aa31LG10G14120 Aethionema arabicum HOM05D007257 ORTHO05D008924 9.3e-15 84.0 123 47.2
BraA03t11669Z Brassica rapa HOM05D007257 ORTHO05D008924 1.2e-14 83.6 126 43.7
BcaC01g05191 Brassica carinata HOM05D007257 ORTHO05D008924 3.5e-14 82.0 127 43.3
C03p29370 Brassica napus HOM05D007257 ORTHO05D008924 6.0e-14 81.3 127 40.9
BolC3t15284H Brassica oleracea HOM05D007257 ORTHO05D008924 6.0e-14 81.3 127 40.9
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 1.1e-12 77.0 124 40.3
BcaC01g05192 Brassica carinata HOM05D007257 ORTHO05D008924 9.6e-12 73.9 127 41.7
BcaB01g03336 Brassica carinata HOM05D007257 ORTHO05D008924 1.3e-11 73.6 127 40.2
BcaB01g03345 Brassica carinata HOM05D007257 ORTHO05D008924 1.3e-11 73.6 127 40.2
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 1.6e-11 73.2 124 37.9
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 6.2e-11 71.2 124 39.5
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 6.2e-11 71.2 124 39.5
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 6.2e-11 71.2 129 39.5
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 4.0e-10 68.6 132 36.4
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 9.0e-10 67.4 130 38.5
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 9.0e-10 67.4 125 36.8
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.5e-09 66.6 131 35.9
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 1.5e-09 66.6 131 35.9
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 1.5e-09 66.6 125 38.4
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 1.5e-09 66.6 124 37.9
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 2.0e-09 66.2 130 41.5
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 3.4e-09 65.5 131 36.6
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.3e-08 63.5 131 35.1
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 1.3e-08 63.5 124 34.7
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 1.1e-07 60.5 124 33.9
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 1.1e-07 60.5 131 35.1
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 1.4e-07 60.1 121 35.5
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 1.9e-07 59.7 124 33.1
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.9e-07 59.7 126 34.1
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 2.4e-07 59.3 125 33.6
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 2.4e-07 59.3 124 33.1
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 3.2e-07 58.9 127 33.9
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 4.2e-07 58.5 130 34.6
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 5.5e-07 58.2 131 32.8
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 5.5e-07 58.2 125 36.0
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 9.3e-07 57.4 124 31.5
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 9.3e-07 57.4 124 37.1
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 1.6e-06 56.6 127 34.6
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 2.7e-06 55.8 129 34.1
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 3.5e-06 55.5 126 33.3
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 4.6e-06 55.1 130 31.5
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 6.0e-06 54.7 127 30.7
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 6.0e-06 54.7 124 30.6
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 6.0e-06 54.7 130 31.5
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 7.9e-06 54.3 130 33.1


User provided reference genes

Program Settings