Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G57900 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 2.7e-32 141.4 69 100.0
Thhalv10006285m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 6.9e-12 73.6 96 46.9
Sp5g04820 Schrenkiella parvula HOM05D004743 ORTHO05D005698 6.9e-12 73.6 96 46.9
Carub.0004s2455 Capsella rubella HOM05D004743 ORTHO05D005698 3.8e-10 67.8 96 44.8
Sp4g24390 Schrenkiella parvula HOM05D004743 ORTHO05D005698 8.4e-10 66.6 96 44.8
Aa31LG10G12610 Aethionema arabicum HOM05D004743 ORTHO05D005698 1.1e-09 66.2 96 43.8
AL4G40570 Arabidopsis lyrata HOM05D004743 ORTHO05D005698 1.1e-09 66.2 96 42.7
AT2G42210 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 1.1e-09 66.2 96 42.7
CARHR137250 Cardamine hirsuta HOM05D004743 ORTHO05D005698 1.1e-09 66.2 96 43.8
BcaB06g29229 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
BcaC02g12469 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
BcaNung04402 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
A05p02780 Brassica napus HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
C04p03370 Brassica napus HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
BraA05t19270Z Brassica rapa HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
Thhalv10017352m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 1.4e-09 65.9 96 43.8
BcaC02g07257 Brassica carinata HOM05D004743 ORTHO05D005698 1.9e-09 65.5 96 43.8
A04p32050 Brassica napus HOM05D004743 ORTHO05D005698 1.9e-09 65.5 96 43.8
C04p69570 Brassica napus HOM05D004743 ORTHO05D005698 1.9e-09 65.5 96 43.8
BolC4t28455H Brassica oleracea HOM05D004743 ORTHO05D005698 1.9e-09 65.5 96 43.8
BraA04t18662Z Brassica rapa HOM05D004743 ORTHO05D005698 1.9e-09 65.5 96 43.8
Aa31LG1G24060 Aethionema arabicum HOM05D004743 ORTHO05D005698 5.4e-09 63.9 96 41.7
THA.LOC104824464 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 2.7e-08 61.6 96 40.6
THA.LOC104802456 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 6.0e-08 60.5 96 39.6
TPR.G13232 Trifolium pratense HOM05D004743 ORTHO05D005698 6.7e-07 57.0 96 38.5
CiPaw.10G028000 Carya illinoinensis HOM05D004743 ORTHO05D005698 8.7e-07 56.6 96 37.5
Sed0015240 Sechium edule HOM05D004743 ORTHO05D005698 1.1e-06 56.2 96 37.5
Ca_08506_v3 Cicer arietinum L. HOM05D004743 ORTHO05D005698 1.5e-06 55.8 96 37.5
Nn7g36049 Nelumbo nucifera HOM05D004743 ORTHO05D005698 1.5e-06 55.8 96 37.5
Psat3g069720 Pisum sativum HOM05D004743 ORTHO05D005698 1.5e-06 55.8 96 36.5
CANSAT64G2667 Cannabis sativa HOM05D004743 ORTHO05D005698 1.9e-06 55.5 96 36.5
Lalb_Chr04g0259631 Lupinus albus HOM05D004743 ORTHO05D005698 3.3e-06 54.7 96 36.5
Sed0004669 Sechium edule HOM05D004743 ORTHO05D005698 3.3e-06 54.7 96 36.5
ClCG10G017380 Citrullus lanatus HOM05D004743 ORTHO05D005698 4.3e-06 54.3 116 32.8
Cc00_g14600 Coffea canephora HOM05D004743 ORTHO05D005698 4.3e-06 54.3 96 36.5
PGR142G2650 Punica granatum HOM05D004743 ORTHO05D005698 4.3e-06 54.3 96 38.5
Rhsim03G0009100 Rhododendron simsii HOM05D004743 ORTHO05D005698 4.3e-06 54.3 96 35.4
CSS0027207 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 5.6e-06 53.9 96 35.4
CSS0048559 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 5.6e-06 53.9 96 35.4
DCAR_013558 Daucus carota HOM05D004743 ORTHO05D005698 5.6e-06 53.9 96 36.5
Prupe.7G073800 Prunus persica HOM05D004743 ORTHO05D005698 5.6e-06 53.9 96 35.4
Atru.chr8.1050 Acer truncatum HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
Cc06_g22060 Coffea canephora HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FvH4_6g22680 Fragaria vesca HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FAN02G0944 Fragaria x ananassa HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FAN05G2002 Fragaria x ananassa HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FAN09G0554 Fragaria x ananassa HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FAN14G2026 Fragaria x ananassa HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
FAN14G4474 Fragaria x ananassa HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 35.4
TAR623G0239 Trochodendron aralioides HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 36.5
vmacro07935 Vaccinium macrocarpon HOM05D004743 ORTHO05D005698 9.6e-06 53.1 96 34.4


User provided reference genes

Program Settings