Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G57110 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 5.3e-64 247.7 137 100.0
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 3.3e-50 201.8 126 88.9
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 4.5e-39 164.9 126 76.2
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 4.2e-37 158.3 127 72.4
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 1.6e-36 156.4 127 70.1
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 7.9e-36 154.1 127 70.1
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 2.6e-34 149.1 127 67.7
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 1.4e-32 143.3 127 68.5
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 7.7e-31 137.5 130 67.7
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 2.2e-30 136.0 131 66.4
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 6.5e-30 134.4 126 61.1
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 4.7e-28 128.3 132 62.9
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 2.3e-27 125.9 130 64.6
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 2.4e-08 62.8 121 35.5
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 2.4e-08 62.8 134 35.8
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 3.1e-08 62.4 104 41.3
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 7.0e-08 61.2 120 40.8
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 7.0e-08 61.2 112 42.9
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 9.1e-08 60.8 112 42.9
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 9.1e-08 60.8 106 43.4
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 1.2e-07 60.5 122 36.1
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 1.2e-07 60.5 148 41.2
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 1.6e-07 60.1 118 40.7
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 1.6e-07 60.1 134 35.1
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 2.7e-07 59.3 134 34.3
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 3.5e-07 58.9 112 37.5
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 4.5e-07 58.5 144 33.3
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 5.9e-07 58.2 109 37.6
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 5.9e-07 58.2 112 35.7
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 7.7e-07 57.8 113 38.9
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 1.0e-06 57.4 112 36.6
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 1.3e-06 57.0 124 32.3
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 1.7e-06 56.6 136 39.7
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 2.3e-06 56.2 132 36.4
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 2.3e-06 56.2 106 38.7
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 2.3e-06 56.2 129 38.0
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 2.9e-06 55.8 122 35.2
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 2.9e-06 55.8 123 34.1
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 2.9e-06 55.8 103 37.9
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 2.9e-06 55.8 131 32.8
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 3.8e-06 55.5 131 35.9
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 5.0e-06 55.1 153 34.6
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 5.0e-06 55.1 102 36.3
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 6.6e-06 54.7 116 37.9
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 8.6e-06 54.3 104 36.5
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 8.6e-06 54.3 147 34.0
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 8.6e-06 54.3 115 36.5
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 8.6e-06 54.3 128 34.4


User provided reference genes

Program Settings