Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G56670 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.8e-139 498.0 234 100.0
AL5G38040 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-78 297.0 255 60.8
AL5G37880 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.7e-44 183.0 302 38.4
BraA07t29956Z Brassica rapa HOM05D000171 ORTHO05D000101 2.0e-42 176.8 384 34.1
A07p22900 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-42 176.0 384 33.9
AL164U10010 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.0e-32 141.7 392 31.9
Thhalv10010905m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-31 140.2 387 30.0
AL5G16820 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.9e-31 138.7 392 31.6
Carub.0005s0581 Capsella rubella HOM05D000171 ORTHO05D000101 5.5e-29 132.1 382 30.1
C04p46150 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-27 125.6 400 29.2
AL1G46630 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.8e-27 124.8 398 29.9
Carub.0002s0364 Capsella rubella HOM05D000171 ORTHO05D000101 2.6e-26 123.2 338 28.4
A04p12430 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-25 118.6 394 28.2
BraA04t16906Z Brassica rapa HOM05D000171 ORTHO05D000101 6.3e-25 118.6 394 28.2
CARHR258400 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.9e-23 112.1 393 29.0
AL8G26030 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-22 109.8 374 26.7
Carub.0001s3083 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-21 107.8 399 27.1
C04p46160 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-21 107.1 135 49.6
BolC9t53806H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-20 104.4 354 27.7
CARHR166780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.6e-20 102.8 114 46.5
BolC9t53809H Brassica oleracea HOM05D000171 ORTHO05D000101 8.0e-20 101.7 364 26.1
AT5G50220 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.2e-19 99.0 370 29.2
BolC4t26200H Brassica oleracea HOM05D000171 ORTHO05D000101 6.8e-19 98.6 115 51.3
CARHR264630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-19 98.6 366 27.6
BcaC04g23380 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-19 98.2 373 26.5
Sp7g03180 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.8e-19 98.2 137 46.0
C09p08930 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-18 97.1 373 26.3
Sp7g03190 Schrenkiella parvula HOM05D000171 ORTHO05D000101 5.7e-18 95.5 130 46.9
AT1G32420 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-17 94.4 145 44.8
BcaC04g23384 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-17 94.4 383 25.1
CARHR166000 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-17 92.0 145 44.1
CARHR264620 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-17 92.0 359 27.0
BcaB06g27364 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-16 90.5 103 42.7
BolC4t26198H Brassica oleracea HOM05D000002 ORTHO05D000001 1.8e-16 90.5 115 41.7
C09p08970 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-16 89.7 139 35.3
Thhalv10005381m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.6e-14 81.6 116 43.1
AL1G46650 Arabidopsis lyrata HOM05D000171 ORTHO05D012581 4.2e-13 79.3 86 48.8
Thhalv10024019m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.3e-11 73.6 51 74.5
BcaNung06398 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-10 71.2 120 40.0
C03p90650 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-09 67.4 114 41.2
BcaC01g01326 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-09 65.9 114 40.4
BolC3t21387H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-09 65.9 114 40.4
BraA08t32262Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-09 65.9 114 40.4
AT5G62060 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.4e-08 64.3 95 46.3
A08p02150 Brassica napus HOM05D000171 ORTHO05D000101 7.0e-08 62.0 114 39.5
THA.LOC104821025 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 9.2e-08 61.6 106 36.8
AT1G52495 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.5e-07 59.7 83 41.0
Carub.0001s4145 Capsella rubella HOM05D000171 ORTHO05D000101 3.5e-07 59.7 109 40.4
CARHR210940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.5e-07 59.3 124 31.5
CARHR042590 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.8e-07 58.5 109 38.5
AL247U10040 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 57.8 70 50.0
AL1G60730 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-06 56.2 110 35.5


User provided reference genes

Program Settings