Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 1.2e-276 956.1 533 100.0
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 5.8e-260 900.6 535 89.9
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 1.1e-234 816.6 539 83.7
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 3.6e-225 785.0 536 79.5
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 6.6e-203 711.1 546 75.3
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 1.1e-197 693.7 534 73.0
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 1.6e-196 689.9 536 71.1
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 8.0e-193 677.6 524 73.1
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 4.0e-192 675.2 536 74.3
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 8.9e-192 674.1 536 74.1
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 9.5e-186 654.1 536 64.9
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 2.3e-179 632.9 523 72.7
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 4.2e-165 585.5 433 75.8
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 2.6e-159 566.2 420 75.7
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 8.7e-155 551.2 525 56.8
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 2.5e-154 549.7 540 56.9
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 2.5e-154 549.7 538 56.3
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 3.1e-152 542.7 528 56.2
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 2.0e-151 540.0 531 55.9
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 1.3e-150 537.3 537 54.9
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 1.9e-149 533.5 537 54.0
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 3.2e-149 532.7 537 54.2
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 3.5e-148 529.3 539 53.6
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 4.6e-148 528.9 535 53.5
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 1.3e-147 527.3 533 55.9
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 3.9e-147 525.8 537 53.6
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 8.7e-147 524.6 533 54.2
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 1.5e-146 523.9 538 54.1
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 2.5e-146 523.1 539 53.4
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 5.6e-146 521.9 517 55.1
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 4.8e-145 518.8 533 54.2
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 1.8e-144 516.9 528 55.9
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 2.4e-144 516.5 526 54.4
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 5.3e-144 515.4 534 53.2
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 9.0e-144 514.6 516 53.7
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 9.0e-144 514.6 535 52.9
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 1.5e-143 513.8 519 54.5
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 4.5e-143 512.3 535 53.6
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 4.5e-143 512.3 539 53.4
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 1.0e-142 511.1 537 53.6
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 8.4e-142 508.1 536 52.2
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 1.6e-140 503.8 513 58.3
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 2.1e-140 503.4 543 53.0
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 3.5e-140 502.7 505 55.6
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 6.0e-140 501.9 536 52.1
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 1.3e-139 500.7 538 52.8
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 3.9e-139 499.2 517 53.0
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 2.5e-138 496.5 525 53.1
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 4.8e-137 492.3 526 52.5
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 8.2e-137 491.5 523 52.0
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 1.4e-136 490.7 539 51.9
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 3.4e-135 486.1 538 52.4
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 5.8e-135 485.3 525 52.8
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 8.4e-134 481.5 525 50.7
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 7.1e-133 478.4 542 55.0
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 9.3e-133 478.0 488 54.3
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 2.3e-131 473.4 538 52.0
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 2.3e-131 473.4 535 48.8
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 7.4e-130 468.4 555 48.3
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.1e-128 464.5 530 48.5
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 2.4e-128 463.4 512 49.8
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.0e-126 458.0 530 48.5
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.3e-126 457.6 531 51.0
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 2.2e-126 456.8 530 51.1
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 1.4e-125 454.1 548 46.4
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 4.6e-124 449.1 536 48.5
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 7.9e-124 448.4 539 47.9
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 1.8e-123 447.2 540 48.0
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 1.5e-122 444.1 397 59.4
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 4.8e-121 439.1 517 47.8
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 1.8e-120 437.2 570 45.1
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 2.5e-117 426.8 556 45.3
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 1.2e-116 424.5 553 44.8
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 3.8e-110 402.9 537 48.4
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 1.1e-106 391.3 463 48.8
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 6.1e-100 369.0 399 53.1
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 6.8e-99 365.5 405 52.6
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 2.2e-97 360.5 403 52.4
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 9.1e-96 355.1 404 50.2
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.6e-95 354.4 508 42.3
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 2.9e-94 350.1 444 48.9
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 9.4e-93 345.1 413 49.4
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 6.8e-91 339.0 386 50.3
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 1.5e-90 337.8 410 48.3
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 7.0e-88 328.9 410 52.0
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 5.0e-86 322.8 390 49.2
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 1.4e-80 304.7 413 44.3
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 5.4e-80 302.8 749 29.6
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 1.6e-79 301.2 551 38.3
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 1.3e-73 281.6 192 71.9
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 1.1e-72 278.5 339 49.0
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 1.1e-69 268.5 194 68.0
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 2.8e-68 263.8 197 65.0
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 1.9e-64 251.1 327 45.3
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 3.2e-64 250.4 224 55.8
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 4.1e-64 250.0 254 53.1
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 1.2e-58 231.9 182 61.0
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 1.7e-54 218.0 413 33.2
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 1.6e-52 211.5 323 42.4
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 3.8e-33 147.1 456 29.4
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 7.9e-31 139.4 623 26.8
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.8e-30 138.3 221 37.1
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 2.8e-28 131.0 177 46.3
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 6.9e-27 126.3 350 31.7
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 1.1e-24 119.0 214 32.7
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 3.2e-24 117.5 542 25.5
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 3.0e-22 110.9 124 42.7
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 7.4e-21 106.3 118 50.0
Cpa.g.sc138.46 Carica papaya HOM05D007044 ORTHO05D008981 1.7e-17 95.1 63 69.8
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 3.3e-13 80.9 203 27.6
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.3e-12 79.0 55 63.6
SMO351G0583 Selaginella moellendorffii HOM05D005656 ORTHO05D007094 1.3e-12 79.0 197 27.9
Cre03.g164650 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 2.8e-12 77.8 326 24.8
Actinidia16039 Actinidia chinensis HOM05D007044 ORTHO05D008981 1.8e-11 75.1 168 38.1
MCO12G473 Micromonas commoda HOM05D005456 ORTHO05D006805 3.1e-11 74.3 191 29.3
AagrBONN_evm.TU.Sc2ySwM_117.735 Anthoceros agrestis HOM05D004224 ORTHO05D006437 4.5e-10 70.5 190 26.8
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 4.5e-10 70.5 195 26.7
Os09g0411650 Oryza sativa ssp. japonica HOM05D005456 ORTHO05D006805 6.5e-09 66.6 209 28.2
PRCOL_00001538 Prasinoderma coloniale HOM05D007044 ORTHO05D028567 8.5e-09 66.2 224 26.8
PRCOL_00004023 Prasinoderma coloniale HOM05D007044 ORTHO05D044099 1.4e-08 65.5 192 26.0
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 2.5e-08 64.7 203 25.6
Zm00001eb312420 Zea mays HOM05D005456 ORTHO05D006805 3.2e-08 64.3 175 28.0
SMO144G0198 Selaginella moellendorffii HOM05D004224 ORTHO05D001113 4.2e-08 63.9 190 28.4
Zm00001eb347700 Zea mays HOM05D001443 ORTHO05D001352 5.5e-08 63.5 137 35.0
Actinidia33219 Actinidia chinensis HOM05D005456 ORTHO05D006805 1.2e-07 62.4 197 28.9
MCO05G022 Micromonas commoda HOM05D007044 ORTHO05D028567 1.6e-07 62.0 362 24.9
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 1.6e-07 62.0 191 27.2
PRCOL_00002664 Prasinoderma coloniale HOM05D035247 ORTHO05D001113 3.6e-07 60.8 230 27.4
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 3.6e-07 60.8 198 29.3
THA.LOC104801808 Tarenaya hassleriana HOM05D005456 ORTHO05D006805 4.6e-07 60.5 211 27.0
HPP92_011000 Vanilla planifolia HOM05D005456 ORTHO05D006805 6.1e-07 60.1 125 32.0
CSS0014292 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 7.9e-07 59.7 209 26.3
CSS0028557 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 7.9e-07 59.7 209 26.3
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 1.4e-06 58.9 190 27.4
Lsat_1_v5_gn_3_51901 Lactuca sativa HOM05D005456 ORTHO05D006805 1.4e-06 58.9 214 25.7
Pp3c24_9610 Physcomitrium patens HOM05D004224 ORTHO05D001113 1.4e-06 58.9 226 23.0
ATR0564G531 Amborella trichopoda HOM05D005456 ORTHO05D006805 2.3e-06 58.2 185 29.2
Dinv16685 Davidia involucrata HOM05D005456 ORTHO05D006805 2.3e-06 58.2 197 27.4
Atru.chr11.1727 Acer truncatum HOM05D005456 ORTHO05D006805 3.0e-06 57.8 199 27.1
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 3.0e-06 57.8 207 25.1
Aqoxy3G03473 Aquilegia oxysepala HOM05D005456 ORTHO05D006805 3.9e-06 57.4 202 28.2
SMO367G0558 Selaginella moellendorffii HOM05D005456 ORTHO05D006805 3.9e-06 57.4 169 25.4
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 3.9e-06 57.4 207 25.6
Ciclev10031325m.g Citrus clementina HOM05D005456 ORTHO05D006805 6.7e-06 56.6 186 29.6
CBR_g54105 Chara braunii HOM05D006557 ORTHO05D008177 8.8e-06 56.2 168 28.6
PRCOL_00000792 Prasinoderma coloniale HOM05D004224 ORTHO05D028567 8.8e-06 56.2 230 26.1


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