Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 3.8e-131 471.5 234 100.0
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 8.6e-123 443.7 234 93.2
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 7.0e-109 397.5 244 83.6
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 6.2e-105 384.4 246 82.5
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 5.1e-99 364.8 238 79.0
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 1.5e-95 353.2 246 77.6
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 3.3e-90 335.5 236 76.7
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 4.3e-90 335.1 236 76.7
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 1.1e-88 330.5 227 76.7
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 4.0e-88 328.6 227 76.7
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 4.0e-88 328.6 227 76.7
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 8.4e-86 320.9 220 75.5
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 2.4e-85 319.3 228 75.4
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 2.4e-85 319.3 228 75.4
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 5.4e-85 318.2 234 73.1
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 5.4e-85 318.2 234 73.1
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 1.6e-84 316.6 237 73.4
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 3.0e-83 312.4 236 73.3
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.8e-78 295.4 254 66.5
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.8e-75 286.6 250 64.0
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 7.4e-74 281.2 245 63.7
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.9e-70 269.2 252 61.9
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 3.9e-43 179.1 189 50.3
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 6.3e-41 171.8 258 43.8
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 3.1e-40 169.5 251 43.8
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 4.1e-40 169.1 169 56.2
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 4.1e-40 169.1 169 56.2
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.1e-40 169.1 244 43.9
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.1e-40 169.1 244 43.9
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.5e-39 167.2 213 47.9
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 4.5e-39 165.6 238 42.9
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 5.9e-39 165.2 240 45.4
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 7.7e-39 164.9 203 49.3
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 1.7e-38 163.7 191 50.3
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 1.7e-38 163.7 191 50.3
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 1.7e-38 163.7 164 53.0
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 2.9e-38 162.9 226 46.5
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 5.0e-38 162.2 214 47.7
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 1.1e-37 161.0 179 50.3
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 1.1e-37 161.0 246 41.9
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.1e-37 161.0 246 41.9
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 1.4e-37 160.6 254 40.6
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.9e-37 160.2 205 49.3
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 2.5e-37 159.8 208 48.1
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.5e-37 159.8 238 42.9
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 4.2e-37 159.1 245 42.0
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 5.5e-37 158.7 245 41.6
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 9.4e-37 157.9 155 51.0
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 9.4e-37 157.9 241 42.3
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.2e-36 157.5 163 49.7
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 1.2e-36 157.5 185 49.2
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 1.6e-36 157.1 156 51.9
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 3.6e-36 156.0 173 50.3
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 4.7e-36 155.6 151 52.3
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 7.9e-36 154.8 240 41.7
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 1.8e-35 153.7 216 40.3
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.3e-35 153.3 164 50.0
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.9e-35 152.5 164 49.4
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 3.9e-35 152.5 252 42.5
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 5.2e-35 152.1 196 46.9
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 6.7e-35 151.8 235 40.4
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 6.7e-35 151.8 241 40.2
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 8.8e-35 151.4 175 46.3
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 8.8e-35 151.4 164 49.4
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 8.8e-35 151.4 238 40.8
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 8.8e-35 151.4 158 48.7
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 1.1e-34 151.0 231 43.3
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 1.5e-34 150.6 246 40.2
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.5e-34 150.6 162 51.9
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 3.3e-34 149.4 159 50.3
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 4.4e-34 149.1 155 52.3
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 7.4e-34 148.3 172 46.5
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 1.7e-33 147.1 189 45.5
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 2.8e-33 146.4 243 39.5
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 2.8e-33 146.4 169 47.9
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 3.7e-33 146.0 155 51.6
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 4.8e-33 145.6 234 41.9
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 6.3e-33 145.2 242 40.1
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 1.1e-32 144.4 158 50.6
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 1.4e-32 144.1 192 38.5
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 1.8e-32 143.7 248 39.5
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.4e-32 143.3 250 40.4
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 2.4e-32 143.3 162 46.9
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 4.1e-32 142.5 164 47.0
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 5.3e-32 142.1 163 44.8
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 5.3e-32 142.1 239 38.9
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 1.2e-31 141.0 188 45.2
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.2e-31 141.0 250 40.0
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.2e-31 141.0 192 39.6
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 1.6e-31 140.6 240 41.7
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.6e-31 140.6 203 39.9
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 2.6e-31 139.8 192 38.5
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 4.5e-31 139.0 171 48.0
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 7.7e-31 138.3 155 44.5
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 7.7e-31 138.3 250 39.2
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 1.0e-30 137.9 205 38.5
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.0e-30 137.9 155 46.5
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 1.3e-30 137.5 191 37.7
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 8.5e-30 134.8 148 46.6
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 1.5e-29 134.0 155 43.9
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 4.2e-29 132.5 231 36.8
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 5.5e-29 132.1 154 44.8
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 5.5e-29 132.1 154 44.8
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.6e-28 130.6 154 44.2
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 2.1e-28 130.2 158 38.6
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 3.6e-28 129.4 231 37.2
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.4e-27 127.5 166 45.8
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.4e-27 127.5 164 46.3
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 2.0e-26 123.6 152 45.4
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 4.4e-26 122.5 221 32.1
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 4.4e-26 122.5 223 37.7
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 4.4e-26 122.5 193 37.8
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 5.7e-26 122.1 200 39.0
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 5.7e-26 122.1 200 41.5
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 5.7e-26 122.1 214 35.5
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 7.5e-26 121.7 154 44.2
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 1.3e-25 120.9 211 38.4
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 1.3e-25 120.9 211 35.5
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 2.2e-25 120.2 175 42.3
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 2.2e-25 120.2 161 41.6
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 2.8e-25 119.8 154 44.2
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 4.8e-25 119.0 180 41.1
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 4.8e-25 119.0 184 38.6
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 6.3e-25 118.6 157 40.1
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 8.2e-25 118.2 206 37.9
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 3.1e-24 116.3 182 38.5
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 3.5e-23 112.8 201 35.3
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 1.3e-22 110.9 168 41.7
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 1.3e-22 110.9 177 36.2
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 1.3e-22 110.9 177 36.2
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 1.3e-22 110.9 156 45.5
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 2.2e-22 110.2 239 32.6
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 6.5e-22 108.6 157 43.9
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 8.5e-22 108.2 152 37.5
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 1.5e-21 107.5 117 46.2
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 1.9e-21 107.1 180 37.8
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 4.2e-21 105.9 119 50.4
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 7.2e-21 105.1 166 42.2
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.2e-20 104.4 171 40.9
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.2e-20 104.4 118 47.5
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 1.2e-20 104.4 165 40.0
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 1.2e-20 104.4 252 30.6
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 3.6e-20 102.8 153 35.3
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 4.7e-20 102.4 156 39.1
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 8.0e-20 101.7 118 46.6
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.0e-19 101.3 118 46.6
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 2.0e-18 97.1 159 39.0
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 2.2e-17 93.6 152 34.9
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 8.3e-17 91.7 184 33.7
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 2.0e-15 87.0 158 36.1
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 3.5e-15 86.3 188 33.0
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 3.8e-14 82.8 223 30.9
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 5.0e-14 82.4 144 33.3
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.1e-13 81.3 151 31.1
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 5.5e-13 79.0 166 30.7
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 8.0e-12 75.1 87 43.7
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.8e-11 73.9 64 57.8
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 3.0e-11 73.2 191 30.4
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 5.2e-11 72.4 91 42.9
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 3.4e-10 69.7 75 48.0
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 2.2e-09 67.0 125 36.8
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 1.1e-08 64.7 115 30.4
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 1.2e-07 61.2 72 41.7
CBR_g24287 Chara braunii HOM05D004173 ORTHO05D004885 2.7e-07 60.1 251 23.9
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 3.5e-07 59.7 78 42.3
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 5.9e-07 58.9 152 30.3


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