Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G56250 Arabidopsis thaliana HOM05D010126 ORTHO05D010466 2.5e-128 462.2 252 100.0
AL5G37570 Arabidopsis lyrata HOM05D010126 ORTHO05D010466 1.1e-99 367.1 230 89.6
Carub.0005s2303 Capsella rubella HOM05D010126 ORTHO05D010466 2.3e-73 279.6 229 75.5
CARHR166410 Cardamine hirsuta HOM05D010126 ORTHO05D010466 3.3e-64 249.2 216 69.4
Thhalv10006172m.g Eutrema salsugineum HOM05D010126 ORTHO05D010466 2.5e-59 233.0 263 58.2
Aa31LG10G11160 Aethionema arabicum HOM05D010126 ORTHO05D010466 6.1e-58 228.4 254 57.9
BolC6t37518H Brassica oleracea HOM05D010126 ORTHO05D010466 3.0e-57 226.1 264 57.2
Sp5g06250 Schrenkiella parvula HOM05D010126 ORTHO05D010466 9.7e-56 221.1 265 55.8
BcaC08g44773 Brassica carinata HOM05D010126 ORTHO05D010466 4.8e-55 218.8 254 57.9
BcaB02g07661 Brassica carinata HOM05D010126 ORTHO05D010466 1.1e-54 217.6 281 54.1
C06p23440 Brassica napus HOM05D010126 ORTHO05D010466 3.1e-54 216.1 252 57.9
C08p31580 Brassica napus HOM05D010126 ORTHO05D010466 1.2e-53 214.2 234 58.5
BcaC07g39942 Brassica carinata HOM05D010126 ORTHO05D010466 5.0e-52 208.8 224 59.8
BolC8t50779H Brassica oleracea HOM05D010126 ORTHO05D010466 4.2e-51 205.7 224 59.4
BraA07t29952Z Brassica rapa HOM05D010126 ORTHO05D010466 3.6e-50 202.6 253 55.3
BcaB01g00010 Brassica carinata HOM05D010126 ORTHO05D010466 1.2e-48 197.6 257 54.5
A07p22860 Brassica napus HOM05D010126 ORTHO05D010466 1.7e-47 193.7 271 51.7
A09p49230 Brassica napus HOM05D010126 ORTHO05D010466 1.5e-43 180.6 262 51.5
BraA09t40376Z Brassica rapa HOM05D010126 ORTHO05D010466 1.9e-43 180.3 262 51.1
THA.LOC104824352 Tarenaya hassleriana HOM05D010126 ORTHO05D010466 1.0e-28 131.3 222 46.8
Cpa.g.sc19.95 Carica papaya HOM05D010126 ORTHO05D010466 2.7e-13 80.1 233 35.6
Potri.013G083700 Populus trichocarpa HOM05D009452 ORTHO05D010466 4.0e-09 66.2 204 34.8
Prupe.2G260200 Prunus persica HOM05D015621 ORTHO05D015549 9.9e-08 61.6 220 33.6
MD07G1230300 Malus domestica HOM05D015621 ORTHO05D015549 1.3e-07 61.2 217 35.9
GSVIVG01032717001 Vitis vinifera HOM05D009452 ORTHO05D010466 5.4e-06 55.8 221 30.8


User provided reference genes

Program Settings