Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 9.5e-110 400.2 205 100.0
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.1e-94 350.1 202 89.6
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 8.1e-85 317.4 204 79.4
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.8e-84 316.2 205 79.0
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 9.9e-83 310.5 204 82.8
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.3e-77 293.5 207 74.9
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 1.4e-73 280.0 205 73.7
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 1.3e-69 266.9 206 71.8
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 4.8e-69 265.0 206 71.4
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 5.8e-67 258.1 207 69.6
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 5.8e-67 258.1 207 69.6
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 1.3e-58 230.3 209 57.4
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 6.9e-52 208.0 195 60.5
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 6.3e-37 158.3 192 45.8
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 6.3e-37 158.3 192 46.4
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.4e-36 156.4 206 41.7
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 3.1e-36 156.0 207 44.4
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.2e-35 154.1 197 44.2
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.6e-35 153.7 207 44.0
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.0e-34 151.0 204 46.6
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.0e-34 151.0 197 43.7
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 2.2e-34 149.8 205 42.9
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 3.8e-34 149.1 207 41.5
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 8.5e-34 147.9 207 43.5
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.9e-33 146.7 204 43.6
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 2.5e-33 146.4 207 39.6
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 3.2e-33 146.0 199 41.7
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 4.2e-33 145.6 209 43.1
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 4.2e-33 145.6 197 41.6
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 5.5e-33 145.2 200 40.0
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 5.5e-33 145.2 207 40.6
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 7.2e-33 144.8 200 41.5
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 1.2e-32 144.1 196 39.3
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.2e-32 144.1 202 41.6
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 1.6e-32 143.7 205 40.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.1e-32 143.3 207 40.1
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.7e-32 142.9 209 40.7
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 2.7e-32 142.9 207 38.2
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 4.7e-32 142.1 212 41.5
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 8.0e-32 141.4 207 41.1
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 8.0e-32 141.4 199 41.7
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 1.0e-31 141.0 199 40.2
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.0e-31 139.4 210 40.5
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 3.0e-31 139.4 195 40.0
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 3.0e-31 139.4 197 38.1
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.6e-30 136.3 193 42.5
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 2.6e-30 136.3 188 39.9
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 4.4e-30 135.6 197 40.1
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 4.4e-30 135.6 155 49.0
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 4.4e-30 135.6 201 34.8
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 9.7e-30 134.4 207 39.6
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 1.7e-29 133.7 138 49.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 1.7e-29 133.7 202 39.6
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 2.2e-29 133.3 200 39.0
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.2e-29 133.3 202 39.6
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.2e-29 133.3 208 36.5
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 3.7e-29 132.5 207 37.7
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.8e-29 132.1 209 39.2
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 6.3e-29 131.7 209 36.4
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 8.2e-29 131.3 192 41.7
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.1e-28 131.0 209 37.8
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.4e-28 130.6 167 44.3
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 1.8e-28 130.2 163 44.8
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.1e-28 129.4 193 39.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 3.1e-28 129.4 149 46.3
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 4.1e-28 129.0 169 43.2
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 4.1e-28 129.0 169 43.2
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 5.3e-28 128.6 146 45.9
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 7.0e-28 128.3 198 37.4
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 9.1e-28 127.9 186 40.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.6e-27 127.1 207 36.7
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.6e-27 127.1 140 47.1
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 3.5e-27 125.9 215 36.7
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.5e-27 125.6 201 39.8
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.3e-26 124.0 209 39.2
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.7e-26 123.6 199 38.2
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 6.5e-26 121.7 174 38.5
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.5e-26 121.3 145 42.1
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.5e-25 120.6 185 38.4
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.5e-25 120.6 199 37.7
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.6e-24 117.1 178 38.2
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.0e-23 114.4 199 37.2
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 2.3e-23 113.2 178 36.0
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 8.8e-23 111.3 151 42.4
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 1.2e-22 110.9 140 41.4
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 2.6e-22 109.8 199 37.7
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 5.7e-22 108.6 175 38.3
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 1.7e-21 107.1 201 35.3
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.4e-20 104.0 192 35.9
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 4.1e-20 102.4 125 42.4
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 4.5e-19 99.0 201 32.8
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 2.9e-18 96.3 147 38.8
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 8.6e-18 94.7 150 36.7
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.6e-16 90.5 163 34.4
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 8.8e-15 84.7 150 34.7
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 2.0e-14 83.6 157 36.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.0e-10 71.2 151 31.8
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.0e-10 71.2 151 31.8
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 3.8e-10 69.3 77 41.6
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.5e-09 66.6 128 34.4
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 5.7e-06 55.5 199 23.1


User provided reference genes

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