Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G55646 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 4.1e-38 161.8 147 100.0
AL5G36870 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.5e-32 143.3 148 77.7
Sp5g06820 Schrenkiella parvula HOM05D001463 ORTHO05D001282 7.2e-27 124.4 129 72.9
Carub.0005s2241 Capsella rubella HOM05D001463 ORTHO05D001282 6.1e-26 121.3 152 65.1
BcaB02g08404 Brassica carinata HOM05D001463 ORTHO05D001282 3.4e-24 115.5 125 50.4
BcaC07g39895 Brassica carinata HOM05D001463 ORTHO05D001282 1.3e-23 113.6 127 65.4
BcaB01g00071 Brassica carinata HOM05D001463 ORTHO05D001282 2.8e-23 112.5 124 60.5
Thhalv10010805m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 3.7e-23 112.1 127 77.2
BcaC02g09782 Brassica carinata HOM05D001463 ORTHO05D001282 6.3e-23 111.3 126 50.0
A04p04330 Brassica napus HOM05D001463 ORTHO05D001282 1.1e-22 110.5 126 46.8
BraA04t16144Z Brassica rapa HOM05D001463 ORTHO05D001282 1.1e-22 110.5 126 46.8
BolC8t50722H Brassica oleracea HOM05D001463 ORTHO05D001282 4.1e-22 108.6 121 64.5
A09p48650 Brassica napus HOM05D001463 ORTHO05D001282 5.4e-22 108.2 122 63.9
CARHR165710 Cardamine hirsuta HOM05D001463 ORTHO05D001282 9.1e-22 107.5 148 75.7
C08p30990 Brassica napus HOM05D001463 ORTHO05D001282 2.0e-21 106.3 122 63.1
C04p36660 Brassica napus HOM05D001463 ORTHO05D001282 2.3e-20 102.8 125 46.4
BolC4t25129H Brassica oleracea HOM05D001463 ORTHO05D001282 2.3e-20 102.8 125 46.4
C04p67640 Brassica napus HOM05D001463 ORTHO05D001282 3.8e-12 75.5 135 40.7
BolC4t28263H Brassica oleracea HOM05D001463 ORTHO05D001282 3.8e-12 75.5 135 40.7
BraA09t40317Z Brassica rapa HOM05D001463 ORTHO05D001282 3.8e-12 75.5 63 61.9
Sp4g22150 Schrenkiella parvula HOM05D001463 ORTHO05D001282 8.6e-12 74.3 135 47.4
A04p30220 Brassica napus HOM05D001463 ORTHO05D001282 1.5e-11 73.6 135 55.6
BraA04t18486Z Brassica rapa HOM05D001463 ORTHO05D001282 1.5e-11 73.6 135 55.6
AL4G37420 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.9e-11 73.2 134 39.6
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 2.8e-10 69.3 131 42.0
BcaB02g09077 Brassica carinata HOM05D001463 ORTHO05D001282 8.0e-10 67.8 132 44.7
BcaC02g12118 Brassica carinata HOM05D001463 ORTHO05D001282 1.4e-09 67.0 134 38.1
BcaB02g09078 Brassica carinata HOM05D001463 ORTHO05D001282 3.1e-09 65.9 133 38.3
A05p06550 Brassica napus HOM05D001463 ORTHO05D001282 4.0e-09 65.5 135 37.8
CARHR134770 Cardamine hirsuta HOM05D001463 ORTHO05D001282 8.9e-09 64.3 129 46.5
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 2.0e-08 63.2 132 36.4
C04p07650 Brassica napus HOM05D001463 ORTHO05D001282 3.4e-08 62.4 131 37.4
BraA05t19624Z Brassica rapa HOM05D001463 ORTHO05D001282 6.4e-07 58.2 139 34.5
BcaNung07238 Brassica carinata HOM05D001463 ORTHO05D001282 8.3e-07 57.8 28 85.7
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 1.1e-06 57.4 145 31.7
BolC4t22381H Brassica oleracea HOM05D001463 ORTHO05D001282 2.4e-06 56.2 139 34.5
AT2G39855 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 5.4e-06 55.1 95 37.9


User provided reference genes

Program Settings