Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G54530 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 1.2e-149 533.1 267 100.0
AL5G35580 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 1.2e-107 393.7 237 84.4
Carub.0005s2115 Capsella rubella HOM05D010570 ORTHO05D012789 8.9e-84 314.3 208 77.4
CARHR164420 Cardamine hirsuta HOM05D010570 ORTHO05D012789 1.7e-71 273.5 246 63.4
AL5G35570 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 1.3e-45 187.6 236 44.1
AT3G54520 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 5.3e-44 182.2 231 45.0
Carub.0005s2114 Capsella rubella HOM05D010570 ORTHO05D012789 1.7e-42 177.2 237 43.5
BcaB01g00184 Brassica carinata HOM05D010570 ORTHO05D012789 6.5e-34 148.7 201 42.8
BolC8t50580H Brassica oleracea HOM05D010570 ORTHO05D012789 2.5e-33 146.7 213 40.4
A09p47450 Brassica napus HOM05D010570 ORTHO05D012789 4.8e-29 132.5 237 37.6
BcaB01g00185 Brassica carinata HOM05D010570 ORTHO05D012789 6.3e-29 132.1 223 39.0
BcaC07g39812 Brassica carinata HOM05D010570 ORTHO05D012789 2.6e-27 126.7 224 36.6
BcaB01g00187 Brassica carinata HOM05D010570 ORTHO05D012789 5.9e-27 125.6 239 38.1
C08p29710 Brassica napus HOM05D010570 ORTHO05D012789 7.5e-22 108.6 224 34.4
BcaC07g39815 Brassica carinata HOM05D010570 ORTHO05D012789 1.4e-20 104.4 208 35.1
BcaB01g00182 Brassica carinata HOM05D010570 ORTHO05D012789 1.1e-17 94.7 241 32.4
BolC4t28192H Brassica oleracea HOM05D002835 ORTHO05D012737 2.0e-14 84.0 192 32.8
C04p66910 Brassica napus HOM05D002835 ORTHO05D012737 2.6e-14 83.6 192 32.8
THA.LOC104804690 Tarenaya hassleriana HOM05D010570 ORTHO05D012789 1.3e-13 81.3 194 33.0
BcaC02g07443 Brassica carinata HOM05D011026 ORTHO05D012737 1.7e-13 80.9 187 33.2
A04p29610 Brassica napus HOM05D011026 ORTHO05D012737 2.8e-13 80.1 192 31.2
A09p47470 Brassica napus HOM05D010570 ORTHO05D012789 8.3e-13 78.6 97 44.3
Carub.0004s2085 Capsella rubella HOM05D011026 ORTHO05D012737 4.1e-12 76.3 157 34.4
BraA04t18427Z Brassica rapa HOM05D011026 ORTHO05D012737 7.0e-12 75.5 192 30.7
Sp5g07900 Schrenkiella parvula HOM05D010570 ORTHO05D012789 7.0e-12 75.5 125 35.2
Thhalv10017551m.g Eutrema salsugineum HOM05D011026 ORTHO05D012737 4.5e-11 72.8 154 33.8
AT2G38823 Arabidopsis thaliana HOM05D011026 ORTHO05D012737 1.5e-09 67.8 192 30.7
A03p21670 Brassica napus HOM05D011026 ORTHO05D012737 5.5e-09 65.9 212 27.4
BcaC01g05516 Brassica carinata HOM05D011026 ORTHO05D012737 9.4e-09 65.1 212 27.8
C03p25650 Brassica napus HOM05D011026 ORTHO05D012737 9.4e-09 65.1 212 27.8
BolC3t14953H Brassica oleracea HOM05D011026 ORTHO05D012737 9.4e-09 65.1 212 27.8
BraA03t11402Z Brassica rapa HOM05D011026 ORTHO05D012737 4.7e-08 62.8 212 26.9
AL4G36130 Arabidopsis lyrata HOM05D011026 ORTHO05D012737 8.0e-08 62.0 192 29.2


User provided reference genes

Program Settings