Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G54520 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 1.1e-167 593.2 300 100.0
AL5G35570 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 7.6e-140 500.7 293 87.7
Carub.0005s2114 Capsella rubella HOM05D010570 ORTHO05D012789 1.9e-106 389.8 292 72.6
BcaB01g00184 Brassica carinata HOM05D010570 ORTHO05D012789 4.5e-92 342.0 297 62.3
A09p47450 Brassica napus HOM05D010570 ORTHO05D012789 8.2e-78 294.7 299 58.5
BcaB01g00187 Brassica carinata HOM05D010570 ORTHO05D012789 1.1e-74 284.3 297 57.6
BolC8t50580H Brassica oleracea HOM05D010570 ORTHO05D012789 1.5e-66 257.3 220 61.8
BcaB01g00185 Brassica carinata HOM05D010570 ORTHO05D012789 2.2e-62 243.4 237 59.1
BcaC07g39812 Brassica carinata HOM05D010570 ORTHO05D012789 4.5e-60 235.7 241 55.6
C08p29710 Brassica napus HOM05D010570 ORTHO05D012789 5.9e-60 235.3 290 49.3
Sp5g07900 Schrenkiella parvula HOM05D010570 ORTHO05D012789 7.5e-55 218.4 314 44.9
BcaC07g39815 Brassica carinata HOM05D010570 ORTHO05D012789 4.3e-50 202.6 234 53.0
AL5G35580 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 1.7e-46 190.7 294 42.2
Carub.0005s2115 Capsella rubella HOM05D010570 ORTHO05D012789 2.9e-46 189.9 267 43.4
CARHR164420 Cardamine hirsuta HOM05D010570 ORTHO05D012789 3.5e-44 183.0 287 43.2
AT3G54530 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 1.9e-42 177.2 231 45.0
BcaB01g00182 Brassica carinata HOM05D010570 ORTHO05D012789 2.0e-31 140.6 302 33.1
BraA09t40205Z Brassica rapa HOM05D010570 ORTHO05D012789 1.3e-27 127.9 114 61.4
A09p47470 Brassica napus HOM05D010570 ORTHO05D012789 7.3e-26 122.1 142 52.1
A04p29610 Brassica napus HOM05D011026 ORTHO05D012737 2.1e-25 120.6 251 34.7
BolC4t28192H Brassica oleracea HOM05D002835 ORTHO05D012737 2.1e-25 120.6 255 34.9
C04p66910 Brassica napus HOM05D002835 ORTHO05D012737 6.2e-25 119.0 255 34.9
BraA04t18427Z Brassica rapa HOM05D011026 ORTHO05D012737 2.4e-24 117.1 251 34.3
THA.LOC104804690 Tarenaya hassleriana HOM05D010570 ORTHO05D012789 3.1e-24 116.7 265 34.0
BcaC02g07443 Brassica carinata HOM05D011026 ORTHO05D012737 7.1e-21 105.5 258 33.7
AT2G38823 Arabidopsis thaliana HOM05D011026 ORTHO05D012737 2.1e-20 104.0 251 37.5
AL4G36130 Arabidopsis lyrata HOM05D011026 ORTHO05D012737 1.3e-19 101.3 251 36.3
Carub.0004s2085 Capsella rubella HOM05D011026 ORTHO05D012737 2.4e-16 90.5 264 33.3
Thhalv10017551m.g Eutrema salsugineum HOM05D011026 ORTHO05D012737 1.7e-14 84.3 245 31.0
BcaC01g05516 Brassica carinata HOM05D011026 ORTHO05D012737 2.9e-14 83.6 251 29.5
C03p25650 Brassica napus HOM05D011026 ORTHO05D012737 2.9e-14 83.6 251 29.5
BolC3t14953H Brassica oleracea HOM05D011026 ORTHO05D012737 2.9e-14 83.6 251 29.5
BraA03t11402Z Brassica rapa HOM05D011026 ORTHO05D012737 6.4e-14 82.4 251 29.5
A03p21670 Brassica napus HOM05D011026 ORTHO05D012737 1.1e-13 81.6 251 29.1
BcaB01g03619 Brassica carinata HOM05D011026 ORTHO05D012737 1.0e-11 75.1 243 28.8
BcaB01g03620 Brassica carinata HOM05D011026 ORTHO05D012737 4.3e-10 69.7 237 29.5
CARHR133550 Cardamine hirsuta HOM05D011026 ORTHO05D012737 9.0e-08 62.0 110 38.2


User provided reference genes

Program Settings