Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-54 216.1 106 100.0
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.9e-35 150.2 90 83.3
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.9e-24 115.9 92 63.0
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 3.5e-23 111.7 85 65.9
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.0e-22 110.2 97 60.8
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-22 109.0 91 62.6
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-22 109.0 91 62.6
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 3.9e-22 108.2 91 60.4
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 3.9e-22 108.2 91 60.4
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-21 106.7 88 61.4
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 7.3e-21 104.0 91 58.2
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 7.3e-21 104.0 91 59.3
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 7.3e-21 104.0 91 59.3
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 7.3e-21 104.0 91 59.3
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 7.3e-21 104.0 102 56.9
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 7.3e-21 104.0 93 57.0
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-20 103.2 85 62.4
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.8e-20 102.1 76 69.7
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 3.6e-20 101.7 89 59.6
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 3.6e-20 101.7 85 62.4
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 3.6e-20 101.7 85 62.4
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 4.7e-20 101.3 85 62.4
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-20 101.3 85 62.4
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 6.8e-19 97.4 85 60.0
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 6.8e-19 97.4 85 60.0
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.5e-18 96.3 91 53.8
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 9.8e-18 93.6 91 54.9
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 9.8e-18 93.6 91 54.9
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 1.7e-17 92.8 81 58.0
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-17 92.8 81 58.0
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.2e-16 88.6 69 65.2
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 4.1e-16 88.2 81 55.6
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 4.1e-16 88.2 81 55.6
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 5.4e-16 87.8 83 53.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 5.4e-16 87.8 83 53.0
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.0e-14 83.6 90 53.3
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.9e-13 79.3 66 59.1
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 2.5e-13 79.0 90 48.9
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.5e-13 77.0 90 46.7
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 1.2e-12 76.6 85 52.9
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.1e-12 75.9 65 55.4
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 3.6e-12 75.1 94 44.7
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 3.6e-12 75.1 94 44.7
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 8.1e-12 73.9 94 43.6
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.8e-11 72.8 97 43.3
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.8e-11 72.8 94 43.6
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.2e-10 70.1 80 45.0
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.5e-10 69.7 77 46.8
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.5e-10 69.7 77 45.5
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 2.6e-10 68.9 78 43.6
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 2.6e-10 68.9 84 44.0
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 3.4e-10 68.6 86 43.0
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 4.4e-10 68.2 82 41.5
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.6e-10 67.4 76 44.7
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 7.6e-10 67.4 83 49.4
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 7.6e-10 67.4 93 40.9
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-09 66.6 93 40.9
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 1.3e-09 66.6 93 40.9
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 3.8e-09 65.1 93 39.8
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 6.4e-09 64.3 85 42.4
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 6.4e-09 64.3 93 39.8
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 8.4e-09 63.9 89 44.9
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 8.4e-09 63.9 56 48.2
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 8.4e-09 63.9 56 48.2
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.4e-08 61.2 77 44.2
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.4e-08 61.2 77 42.9
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-07 59.3 77 40.3
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 3.5e-07 58.5 71 43.7
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 7.8e-07 57.4 81 40.7
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.0e-06 57.0 55 45.5
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.1e-06 54.7 50 56.0


User provided reference genes

Program Settings