Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 4.9e-70 267.7 137 100.0
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 5.8e-63 244.2 140 92.9
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.2e-55 219.9 135 84.4
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.3e-54 216.5 137 79.6
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.3e-51 205.7 140 80.0
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.3e-49 199.9 138 79.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-48 196.8 138 77.5
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-48 196.8 138 77.5
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 3.1e-48 195.3 140 76.4
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.0e-47 192.6 142 75.4
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 3.4e-47 191.8 140 75.0
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 3.8e-46 188.3 137 73.0
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 3.8e-46 188.3 139 74.8
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 3.8e-46 188.3 139 74.8
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.5e-45 185.7 139 74.8
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-42 176.8 132 73.5
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.1e-42 176.8 132 73.5
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 6.9e-40 167.5 146 65.1
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.7e-38 162.9 138 65.2
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.5e-37 159.1 140 60.7
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.2e-37 158.7 148 60.1
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 7.2e-37 157.5 148 60.1
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 9.4e-37 157.1 140 60.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.2e-36 156.8 148 60.8
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.6e-36 156.4 140 60.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 2.7e-36 155.6 145 61.4
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 4.7e-36 154.8 142 62.7
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 7.9e-36 154.1 111 70.3
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.8e-35 152.9 111 67.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.8e-35 152.9 137 58.4
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.8e-35 152.9 145 59.3
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 2.3e-35 152.5 127 60.6
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 5.1e-35 151.4 141 60.3
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.1e-34 150.2 139 60.4
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.1e-34 150.2 143 58.0
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.6e-34 149.1 138 58.7
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.3e-34 148.7 137 58.4
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.4e-34 148.3 139 60.4
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 4.4e-34 148.3 169 52.7
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 5.7e-34 147.9 120 69.2
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 5.7e-34 147.9 109 67.0
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 5.7e-34 147.9 137 59.1
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 7.4e-34 147.5 88 79.5
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 7.4e-34 147.5 138 58.7
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.3e-33 146.7 139 58.3
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.7e-33 146.4 93 75.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 1.7e-33 146.4 90 77.8
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-33 146.4 142 56.3
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.2e-33 146.0 139 61.2
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.8e-33 145.6 132 59.8
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 4.8e-33 144.8 143 58.0
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 8.2e-33 144.1 108 69.4
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.4e-32 143.3 108 68.5
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.8e-32 142.9 90 76.7
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 2.4e-32 142.5 133 63.2
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.4e-32 142.5 112 64.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 3.1e-32 142.1 87 77.0
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 4.1e-32 141.7 111 67.6
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.3e-32 141.4 146 58.2
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 9.1e-32 140.6 114 66.7
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.2e-31 140.2 90 80.0
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.2e-31 140.2 109 66.1
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 4.5e-31 138.3 90 72.2
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 7.7e-31 137.5 96 68.8
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.0e-30 137.1 149 53.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 1.3e-30 136.7 117 65.0
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.7e-30 136.3 117 65.0
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.7e-30 136.3 145 56.6
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.7e-30 136.3 89 75.3
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.9e-30 135.6 106 63.2
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.9e-30 135.6 106 63.2
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.8e-30 135.2 120 63.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.8e-30 135.2 88 76.1
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 3.8e-30 135.2 122 61.5
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 3.8e-30 135.2 109 63.3
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 5.0e-30 134.8 121 61.2
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.1e-29 133.7 91 75.8
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.5e-29 132.5 87 72.4
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 3.2e-29 132.1 144 54.9
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 4.2e-29 131.7 90 74.4
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 4.2e-29 131.7 106 61.3
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 5.5e-29 131.3 109 61.5
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 2.1e-28 129.4 116 60.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.7e-28 129.0 151 54.3
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.4e-27 126.7 144 52.8
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 4.4e-26 121.7 74 78.4
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.4e-26 121.7 88 70.5
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 8.2e-25 117.5 71 77.5
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 1.4e-24 116.7 84 70.2
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 3.1e-24 115.5 66 81.8
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 4.1e-24 115.2 83 69.9
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 9.1e-24 114.0 66 77.3
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 3.2e-21 105.5 120 50.0
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 7.2e-21 104.4 104 47.1
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 4.8e-17 91.7 110 48.2
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 6.3e-17 91.3 88 58.0
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.2e-13 79.0 72 56.9
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.1e-12 76.3 113 41.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 8.0e-12 74.3 121 40.5
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 6.8e-11 71.2 82 39.0
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 4.8e-09 65.1 46 63.0


User provided reference genes

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