Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G53342 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.0e-34 149.4 73 100.0
AT4G18692 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 6.8e-34 146.7 73 97.3
AT1G55710 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.7e-32 142.1 73 95.9
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 4.4e-25 117.5 62 91.9
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 1.7e-21 105.5 62 90.3
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 1.9e-20 102.1 62 88.7
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 4.7e-19 97.4 62 83.9
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 2.2e-16 88.6 63 79.4
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 4.9e-16 87.4 62 79.0
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 1.1e-15 86.3 70 71.4
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 5.0e-13 77.4 70 65.7
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 1.1e-12 76.3 65 70.8
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 3.3e-12 74.7 64 70.3
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 4.3e-12 74.3 60 71.7
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 1.2e-11 72.8 63 69.8
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 2.8e-11 71.6 68 64.7
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 3.6e-11 71.2 67 61.2
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.8e-10 68.9 62 66.1
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 3.1e-10 68.2 64 67.2
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 3.1e-10 68.2 62 66.1
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 6.8e-10 67.0 63 63.5
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 6.8e-10 67.0 66 63.6
BcaC08g44641 Brassica carinata HOM05D004429 ORTHO05D021447 8.9e-10 66.6 42 83.3
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 3.4e-09 64.7 62 62.9
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 3.4e-09 64.7 62 62.9
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 7.5e-09 63.5 68 63.2
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 2.9e-08 61.6 66 57.6
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.9e-08 60.8 63 63.5
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 4.9e-08 60.8 64 54.7
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 4.9e-08 60.8 64 54.7
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 1.1e-07 59.7 66 62.1
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 1.1e-07 59.7 66 62.1
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 1.9e-07 58.9 70 50.0
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.1e-07 57.8 60 56.7
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 7.0e-07 57.0 60 55.0
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.2e-06 56.2 69 50.7
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 2.0e-06 55.5 66 54.5
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 3.5e-06 54.7 63 58.7
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 3.5e-06 54.7 63 50.8
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 6.0e-06 53.9 67 49.3
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 7.8e-06 53.5 66 48.5
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 7.8e-06 53.5 65 55.4


User provided reference genes

Program Settings