Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G52561 Arabidopsis thaliana HOM05D011037 ORTHO05D014883 7.8e-49 196.8 100 100.0
AL5G33330 Arabidopsis lyrata HOM05D011037 ORTHO05D014883 2.1e-41 172.2 100 85.0
Carub.0005s1898 Capsella rubella HOM05D011037 ORTHO05D014883 2.1e-33 145.6 101 75.2
Thhalv10011097m.g Eutrema salsugineum HOM05D011037 ORTHO05D014883 4.6e-25 117.9 101 66.3
Sp5g09740 Schrenkiella parvula HOM05D011037 ORTHO05D014883 1.1e-21 106.7 101 61.4
BcaB02g08562 Brassica carinata HOM05D011037 ORTHO05D014883 1.3e-19 99.8 101 58.4
C04p40470 Brassica napus HOM05D011037 ORTHO05D014883 1.4e-18 96.3 95 55.8
BolC4t25627H Brassica oleracea HOM05D011037 ORTHO05D014883 1.4e-18 96.3 95 55.8
BcaC02g09246 Brassica carinata HOM05D011037 ORTHO05D014883 1.9e-18 95.9 95 55.8
A04p06840 Brassica napus HOM05D011037 ORTHO05D014883 4.2e-18 94.7 101 55.4
BraA04t16385Z Brassica rapa HOM05D011037 ORTHO05D014883 4.2e-18 94.7 101 55.4
CARHR162350 Cardamine hirsuta HOM05D011037 ORTHO05D014883 9.6e-15 83.6 100 51.0
BcaB02g07828 Brassica carinata HOM05D011037 ORTHO05D014883 6.9e-13 77.4 101 50.5
A09p45660 Brassica napus HOM05D011037 ORTHO05D024373 1.0e-08 63.5 100 43.0
BraA09t40027Z Brassica rapa HOM05D011037 ORTHO05D024373 1.0e-08 63.5 100 43.0
BcaC07g39625 Brassica carinata HOM05D011037 ORTHO05D024373 2.3e-08 62.4 100 43.0
C08p27860 Brassica napus HOM05D011037 ORTHO05D024373 2.3e-08 62.4 100 43.0
BolC8t50401H Brassica oleracea HOM05D011037 ORTHO05D024373 2.3e-08 62.4 100 43.0
BraA02t04875Z Brassica rapa HOM05D001667 ORTHO05D001508 3.7e-06 55.1 74 40.5
BNapus_Darmor_BZH_scaffold_145p00050 Brassica napus HOM05D001667 ORTHO05D001508 8.2e-06 53.9 98 37.8
BraA01t04173Z Brassica rapa HOM05D001667 ORTHO05D001508 8.2e-06 53.9 98 37.8


User provided reference genes

Program Settings