Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 1.0e-145 520.0 260 100.0
AL5G32220 Arabidopsis lyrata HOM05D007653 ORTHO05D009670 6.8e-129 464.2 251 92.8
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 1.7e-124 449.5 260 87.7
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 4.0e-121 438.3 261 85.1
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 2.9e-119 432.2 263 85.6
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 2.3e-116 422.5 261 82.4
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 2.3e-116 422.5 261 82.4
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 2.3e-116 422.5 261 82.4
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 8.6e-116 420.6 261 82.0
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 8.6e-116 420.6 261 82.0
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 2.8e-114 415.6 263 81.0
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 2.2e-111 406.0 252 82.1
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 5.1e-76 288.5 261 65.1
THA.LOC104806615 Tarenaya hassleriana HOM05D007653 ORTHO05D009670 7.4e-59 231.5 279 50.9
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 5.2e-36 155.6 260 41.5
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.8e-34 149.8 258 40.3
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 1.1e-33 147.9 258 39.9
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 2.4e-33 146.7 283 39.9
C07p46580 Brassica napus HOM05D007653 ORTHO05D009670 3.1e-33 146.4 98 83.7
A03p48490 Brassica napus HOM05D007653 ORTHO05D009670 5.4e-33 145.6 99 79.8
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.0e-32 143.7 258 39.1
BraA03t13954Z Brassica rapa HOM05D007653 ORTHO05D009670 1.3e-31 141.0 99 76.8
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 1.6e-29 134.0 278 37.1
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 8.9e-28 128.3 258 35.7
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 1.2e-27 127.9 256 37.9
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 2.0e-27 127.1 259 35.9
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 7.5e-27 125.2 280 34.6
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 1.3e-26 124.4 266 32.7
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 1.7e-26 124.0 282 34.8
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 2.2e-26 123.6 263 34.6
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 3.7e-26 122.9 252 34.1
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 7.0e-25 118.6 257 34.6
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 1.2e-24 117.9 241 34.0
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 2.7e-24 116.7 255 34.1
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 7.8e-24 115.2 254 33.1
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 1.3e-23 114.4 260 35.0
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 2.3e-23 113.6 238 33.2
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 2.9e-23 113.2 252 32.5
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 3.8e-23 112.8 271 33.6
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 5.0e-23 112.5 241 34.9
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 1.6e-21 107.5 281 35.6
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 2.1e-21 107.1 253 33.6
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 8.0e-21 105.1 268 31.7
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 8.0e-21 105.1 265 32.5
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 2.3e-20 103.6 253 32.8
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 2.6e-19 100.1 270 32.2
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 2.6e-19 100.1 280 29.6
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 3.4e-19 99.8 269 30.9
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 4.4e-19 99.4 276 33.7
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 7.5e-19 98.6 255 33.7
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 7.5e-19 98.6 257 34.2
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 9.8e-19 98.2 265 35.5
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 2.2e-18 97.1 261 31.0
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 2.9e-18 96.7 239 35.1
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 6.4e-18 95.5 266 32.3
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 1.1e-17 94.7 261 30.3
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 1.4e-17 94.4 252 30.6
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 7.0e-17 92.0 261 31.8
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 2.0e-16 90.5 245 31.4
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 1.7e-15 87.4 262 32.4
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 2.3e-15 87.0 270 31.5
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 1.9e-14 84.0 263 31.2
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 5.6e-14 82.4 218 31.2
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 5.6e-14 82.4 262 31.7
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 4.7e-13 79.3 277 30.0
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 6.2e-13 79.0 287 27.5
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 8.0e-13 78.6 263 30.4
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 1.1e-12 78.2 263 29.3
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 1.4e-12 77.8 243 32.9
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 3.1e-12 76.6 258 29.1
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 5.2e-12 75.9 250 30.0
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 4.4e-11 72.8 239 31.8
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 5.8e-11 72.4 263 30.8
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 9.8e-11 71.6 246 27.6
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 9.8e-11 71.6 246 28.9
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 2.9e-10 70.1 231 31.2
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 3.7e-10 69.7 263 26.6
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 3.7e-10 69.7 256 28.9
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 1.9e-09 67.4 236 30.9
BcaC06g33348 Brassica carinata HOM05D007653 ORTHO05D009670 5.4e-09 65.9 82 53.7
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.6e-08 64.3 281 27.8
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 5.0e-07 59.3 237 28.7
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 4.3e-06 56.2 290 25.5


User provided reference genes

Program Settings