Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 4.3e-171 605.1 427 100.0
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 5.2e-153 545.0 431 81.9
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.2e-151 539.7 430 90.0
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.5e-139 499.6 431 83.5
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 5.4e-134 481.9 429 84.8
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.5e-91 340.9 409 65.3
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 9.7e-91 338.2 411 68.1
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-89 334.3 409 68.2
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 3.1e-89 333.2 406 65.5
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 5.3e-89 332.4 412 66.3
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.5e-88 330.9 409 64.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 4.5e-88 329.3 414 63.0
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.2e-87 327.0 414 65.5
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 2.2e-87 327.0 412 69.7
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 6.5e-87 325.5 261 73.6
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 6.5e-87 325.5 261 73.6
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 6.5e-87 325.5 404 67.1
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.2e-86 322.8 412 66.5
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.2e-86 322.8 423 68.6
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 4.2e-86 322.8 416 66.6
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.5e-86 322.4 400 65.2
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.5e-86 322.4 255 72.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.5e-86 322.4 255 72.9
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 5.5e-86 322.4 417 58.0
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.7e-85 320.1 403 66.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.8e-84 317.4 402 64.4
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 3.9e-84 316.2 419 67.1
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 6.7e-84 315.5 402 64.2
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 8.8e-84 315.1 415 61.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.5e-83 314.3 416 65.6
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.6e-83 313.5 255 71.0
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 3.3e-83 313.2 422 63.5
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 5.7e-83 312.4 439 61.3
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 9.7e-83 311.6 261 72.8
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.8e-82 310.1 415 62.9
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.8e-82 310.1 255 75.7
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.8e-82 310.1 255 75.7
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 8.2e-82 308.5 423 61.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.2e-82 308.5 428 58.6
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.4e-81 307.8 408 66.4
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.8e-81 307.4 413 65.4
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.1e-81 306.6 407 66.8
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.3e-81 305.8 255 75.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 9.1e-81 305.1 420 63.8
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.6e-80 303.5 368 67.9
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 1.7e-79 300.8 219 80.8
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 2.9e-79 300.1 428 63.8
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 3.8e-79 299.7 217 78.8
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 6.5e-79 298.9 369 67.2
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 6.5e-79 298.9 431 60.8
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.5e-78 297.7 418 63.9
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.5e-78 297.0 276 66.7
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 5.5e-78 295.8 464 51.3
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 7.2e-78 295.4 260 68.8
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 7.2e-78 295.4 415 64.3
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 2.7e-77 293.5 425 59.5
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.7e-77 293.5 433 58.4
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.0e-76 291.6 414 64.5
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 4.0e-76 289.7 415 62.7
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.2e-76 289.3 414 60.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.0e-75 287.3 428 60.3
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 7.5e-75 285.4 449 54.3
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.7e-74 284.3 409 61.4
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 2.2e-74 283.9 259 66.0
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 3.7e-74 283.1 441 51.0
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 8.3e-74 282.0 455 64.8
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.1e-73 281.6 413 63.9
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 4.1e-73 279.6 406 62.8
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 7.0e-73 278.9 417 62.1
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.6e-72 277.7 415 64.8
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 2.7e-72 276.9 435 59.1
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 3.5e-72 276.6 406 64.8
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 5.9e-72 275.8 219 73.1
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.0e-71 275.0 431 57.3
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.8e-71 273.1 161 84.5
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 5.0e-71 272.7 267 64.0
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.9e-70 270.8 260 64.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.2e-70 270.0 222 69.8
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.2e-70 269.6 267 63.7
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 7.2e-70 268.9 260 67.7
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.1e-69 267.3 419 62.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.7e-69 266.9 161 82.6
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 8.0e-69 265.4 390 57.2
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.0e-68 265.0 450 58.4
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.0e-68 265.0 437 60.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.8e-66 256.9 160 77.5
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.6e-64 251.1 356 60.4
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 7.7e-64 248.8 263 58.2
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.9e-63 246.9 147 81.6
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 5.5e-62 242.7 160 73.8
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-61 241.1 159 74.2
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 6.1e-61 239.2 160 71.9
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 6.1e-61 239.2 160 71.9
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 6.1e-61 239.2 160 71.9
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 6.1e-61 239.2 160 71.9
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 3.0e-60 236.9 160 71.2
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.2e-59 235.0 221 64.3
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 4.4e-59 233.0 221 63.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 8.3e-58 228.8 267 60.3
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.3e-54 216.9 161 67.7
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.2e-51 208.4 157 65.0
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.2e-50 204.1 161 63.4
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.5e-48 196.8 160 61.9
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.5e-48 196.8 160 61.9
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.3e-47 194.1 159 76.1
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-45 187.2 162 60.5
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-45 187.2 162 60.5
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.3e-39 167.5 152 58.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 8.6e-31 139.0 163 49.1
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 7.6e-27 125.9 163 46.0
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.1e-24 117.9 161 44.1
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 2.1e-21 107.8 159 43.4
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 3.9e-15 87.0 58 74.1
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 8.7e-15 85.9 139 39.6
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.2e-11 75.5 112 41.1
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.2e-08 65.5 95 42.1
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 4.6e-08 63.5 85 44.7


User provided reference genes

Program Settings