Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.8e-94 349.4 190 100.0
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.2e-82 310.1 190 83.7
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 6.6e-57 224.6 215 58.1
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.1e-56 223.8 215 58.6
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 1.6e-55 219.9 215 56.7
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.2e-53 213.8 206 57.3
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 1.2e-53 213.8 214 55.6
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 2.0e-53 213.0 205 56.6
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 7.6e-53 211.1 207 55.1
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 1.3e-52 210.3 213 54.5
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 3.8e-52 208.8 211 56.4
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 3.8e-52 208.8 213 54.0
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-51 207.2 216 54.2
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 1.4e-51 206.8 213 53.1
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 3.5e-50 202.2 216 52.8
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 3.9e-49 198.7 216 52.3
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 1.5e-48 196.8 216 51.4
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 2.8e-47 192.6 170 59.4
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 4.8e-47 191.8 217 50.7
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 4.8e-47 191.8 216 51.4
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 1.1e-46 190.7 217 51.6
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 4.0e-46 188.7 216 50.9
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 1.2e-45 187.2 216 50.9
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 9.9e-45 184.1 209 51.2
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 1.4e-43 180.3 216 53.2
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.9e-40 169.9 208 49.0
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 1.7e-36 156.8 210 49.0
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 1.7e-36 156.8 210 49.0
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 9.3e-35 151.0 207 45.4
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 9.0e-30 134.4 148 54.7
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 3.9e-25 119.0 188 38.3
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 6.7e-17 91.7 142 41.5
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 2.9e-12 76.3 141 39.0
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 4.7e-10 68.9 141 31.9
MD02G1163800 Malus domestica HOM05D008738 ORTHO05D010755 8.8e-09 64.7 153 31.4
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.0e-08 63.5 150 30.0
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 2.6e-08 63.2 152 32.9
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 7.4e-08 61.6 191 30.4
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 1.3e-07 60.8 162 29.0
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 8.2e-07 58.2 95 47.4
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 3.1e-06 56.2 198 27.8


User provided reference genes

Program Settings