Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G49580 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 6.8e-35 150.2 81 100.0
AL5G29420 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 9.2e-24 113.2 67 91.0
Carub.0005s1591 Capsella rubella HOM05D003381 ORTHO05D003880 2.5e-21 105.1 67 83.6
BcaB01g00694 Brassica carinata HOM05D003381 ORTHO05D003880 2.3e-19 98.6 67 79.1
BcaC07g39421 Brassica carinata HOM05D003381 ORTHO05D003880 2.3e-19 98.6 67 79.1
CARHR158590 Cardamine hirsuta HOM05D003381 ORTHO05D003880 5.2e-19 97.4 67 79.1
Sp5g12530 Schrenkiella parvula HOM05D003381 ORTHO05D003880 6.8e-19 97.1 67 76.1
Carub.0005s1590 Capsella rubella HOM05D003381 ORTHO05D003880 2.0e-18 95.5 63 81.0
AT3G49570 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 3.4e-18 94.7 67 76.1
A06p18160 Brassica napus HOM05D003381 ORTHO05D003880 5.8e-18 94.0 67 74.6
BolC8t50073H Brassica oleracea HOM05D003381 ORTHO05D003880 5.8e-18 94.0 70 74.3
Thhalv10010815m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 9.8e-18 93.2 65 78.5
BcaC07g39418 Brassica carinata HOM05D003381 ORTHO05D003880 2.2e-17 92.0 70 71.4
BcaC07g39419 Brassica carinata HOM05D003381 ORTHO05D003880 3.7e-17 91.3 70 71.4
A06p18190 Brassica napus HOM05D003381 ORTHO05D003880 3.7e-17 91.3 70 71.4
BraA06t24903Z Brassica rapa HOM05D003381 ORTHO05D003880 3.7e-17 91.3 70 71.4
AL5G29410 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 8.3e-17 90.1 67 71.6
Sp5g12540 Schrenkiella parvula HOM05D003381 ORTHO05D003880 4.1e-16 87.8 72 69.4
C08p24550 Brassica napus HOM05D003381 ORTHO05D003880 3.5e-15 84.7 58 79.3
BolC8t50074H Brassica oleracea HOM05D003381 ORTHO05D003880 3.5e-15 84.7 58 79.3
AT5G24660 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 7.8e-15 83.6 67 67.2
A06p35480 Brassica napus HOM05D003381 ORTHO05D003880 3.9e-14 81.3 67 64.2
BraA06t26471Z Brassica rapa HOM05D003381 ORTHO05D003880 3.9e-14 81.3 67 64.2
CARHR158580 Cardamine hirsuta HOM05D003381 ORTHO05D003880 3.9e-14 81.3 67 67.2
BcaNung02004 Brassica carinata HOM05D003381 ORTHO05D003880 5.0e-14 80.9 67 64.2
C07p43060 Brassica napus HOM05D003381 ORTHO05D003880 5.0e-14 80.9 67 64.2
BolC7t44833H Brassica oleracea HOM05D003381 ORTHO05D003880 5.0e-14 80.9 67 64.2
Thhalv10005368m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 6.6e-14 80.5 67 64.2
Aa31LG11G3910 Aethionema arabicum HOM05D003381 ORTHO05D003880 1.1e-13 79.7 70 61.4
AL6G36270 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 1.1e-13 79.7 67 62.7
CARHR188800 Cardamine hirsuta HOM05D003381 ORTHO05D003880 1.1e-13 79.7 67 62.7
Carub.0006s2251 Capsella rubella HOM05D003381 ORTHO05D003880 1.5e-13 79.3 68 64.7
Sp2g22730 Schrenkiella parvula HOM05D003381 ORTHO05D003880 1.5e-13 79.3 67 62.7
Carub.0006s2252 Capsella rubella HOM05D003381 ORTHO05D003880 3.3e-13 78.2 67 61.2
AL6G36260 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 7.3e-13 77.0 67 61.2
AT5G24655 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 9.5e-13 76.6 67 61.2
A02p40150 Brassica napus HOM05D003381 ORTHO05D003880 3.6e-12 74.7 58 67.2
BcaC03g17951 Brassica carinata HOM05D003381 ORTHO05D003880 1.8e-11 72.4 58 65.5
BolC2t12066H Brassica oleracea HOM05D003381 ORTHO05D003880 1.8e-11 72.4 58 65.5
C02p60110 Brassica napus HOM05D003381 ORTHO05D003880 4.0e-11 71.2 58 63.8
BraA02t08981Z Brassica rapa HOM05D003381 ORTHO05D003880 4.0e-11 71.2 58 63.8
Aa31LG4G18060 Aethionema arabicum HOM05D003381 ORTHO05D003880 2.6e-10 68.6 71 59.2
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 2.6e-10 68.6 54 66.7
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.1e-08 63.2 74 50.0
BcaC09g49963 Brassica carinata HOM05D003381 ORTHO05D003880 3.2e-08 61.6 40 80.0
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 2.7e-07 58.5 63 52.4
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 3.9e-06 54.7 61 52.5
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 3.9e-06 54.7 61 52.5
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 5.1e-06 54.3 57 57.9
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 5.1e-06 54.3 62 51.6
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 6.6e-06 53.9 64 50.0
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 8.6e-06 53.5 64 50.0
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 8.6e-06 53.5 66 53.0
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 8.6e-06 53.5 76 44.7
Zm00001eb231110 Zea mays HOM05D003381 ORTHO05D003880 8.6e-06 53.5 62 50.0


User provided reference genes

Program Settings