Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.4e-50 202.6 97 100.0
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 9.0e-42 173.3 93 88.2
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.9e-26 120.6 104 57.7
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.9e-23 112.5 108 50.0
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 1.2e-22 109.8 107 55.1
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 3.0e-21 105.1 61 70.5
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.3e-20 101.7 112 51.8
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 5.6e-20 100.9 107 48.6
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 5.6e-20 100.9 115 46.1
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.3e-19 99.8 111 48.6
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.1e-18 96.7 94 57.4
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 2.0e-17 92.4 111 45.9
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 5.8e-17 90.9 103 43.7
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.7e-16 89.4 111 44.1
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.2e-16 89.0 111 46.8
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 4.9e-16 87.8 102 43.1
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 1.1e-15 86.7 66 51.5
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 1.2e-14 83.2 111 42.3
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 6.0e-14 80.9 64 53.1
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 6.0e-14 80.9 87 44.8
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 1.3e-13 79.7 78 44.9
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 1.3e-13 79.7 78 44.9
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 1.8e-13 79.3 104 38.5
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 2.3e-13 79.0 104 38.5
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 2.3e-13 79.0 102 38.2
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.9e-13 78.2 104 42.3
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 5.1e-13 77.8 102 37.3
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 5.1e-13 77.8 102 37.3
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 5.1e-13 77.8 102 37.3
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 6.7e-13 77.4 102 37.3
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 6.7e-13 77.4 102 37.3
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.1e-12 76.6 96 43.8
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 1.1e-12 76.6 102 37.3
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.9e-12 75.9 103 38.8
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 1.9e-12 75.9 102 37.3
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 1.9e-12 75.9 102 37.3
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 3.3e-12 75.1 102 37.3
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 3.3e-12 75.1 104 37.5
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 4.3e-12 74.7 104 38.5
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.4e-12 73.9 78 41.0
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.4e-12 73.9 78 41.0
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 1.6e-11 72.8 97 39.2
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 3.7e-11 71.6 104 35.6
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 6.3e-11 70.9 103 36.9
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 1.4e-10 69.7 104 34.6
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 2.4e-10 68.9 78 38.5
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.1e-10 68.6 96 37.5
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 4.1e-10 68.2 91 40.7
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 6.9e-10 67.4 96 35.4
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.0e-08 63.5 91 38.5
Carub.0005s1184 Capsella rubella HOM05D008416 ORTHO05D010671 5.5e-07 57.8 57 43.9
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 1.2e-06 56.6 98 27.6
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 6.1e-06 54.3 100 29.0


User provided reference genes

Program Settings