Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.7e-61 238.4 115 100.0
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 4.2e-46 188.0 106 83.0
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 2.5e-27 125.6 84 65.5
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 2.8e-26 122.1 112 51.8
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 6.3e-26 120.9 115 51.3
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 1.4e-25 119.8 117 50.4
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 5.3e-25 117.9 116 52.6
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.5e-24 116.3 107 55.1
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 5.0e-23 111.3 116 48.3
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.2e-22 108.6 108 50.0
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.2e-22 108.6 96 58.3
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 7.2e-22 107.5 117 45.3
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.6e-21 106.3 114 48.2
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 6.7e-20 100.9 114 50.0
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 1.1e-19 100.1 117 43.6
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.5e-19 99.8 109 44.0
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 1.9e-19 99.4 110 41.8
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 8.2e-18 94.0 60 63.3
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 1.1e-17 93.6 112 40.2
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 1.4e-17 93.2 109 40.4
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 1.4e-17 93.2 109 40.4
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 1.4e-17 93.2 109 40.4
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 1.4e-17 93.2 109 40.4
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 1.8e-17 92.8 112 40.2
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 1.8e-17 92.8 114 39.5
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 3.1e-17 92.0 79 46.8
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.1e-17 91.7 110 39.1
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 6.9e-17 90.9 109 40.4
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-17 90.9 109 40.4
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 9.0e-17 90.5 104 41.3
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 9.0e-17 90.5 109 39.4
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.2e-16 90.1 110 38.2
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 1.2e-16 90.1 109 39.4
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.2e-16 90.1 104 43.3
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 1.5e-16 89.7 109 39.4
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 3.4e-16 88.6 104 38.5
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-16 88.6 109 39.4
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 3.4e-16 88.6 104 38.5
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 4.5e-16 88.2 114 39.5
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.7e-16 87.4 98 38.8
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.7e-16 87.4 98 38.8
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.0e-15 87.0 110 34.5
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 1.0e-15 87.0 107 38.3
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 2.9e-15 85.5 71 50.7
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 3.8e-15 85.1 102 39.2
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 1.4e-14 83.2 114 39.5
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 9.4e-14 80.5 73 47.9
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.6e-13 79.7 110 34.5
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 2.7e-13 79.0 104 41.3
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 3.3e-11 72.0 104 33.7
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 4.3e-11 71.6 93 40.9
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 4.3e-11 71.6 107 33.6
Carub.0005s1184 Capsella rubella HOM05D008416 ORTHO05D010671 1.1e-09 67.0 113 33.6
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 3.8e-07 58.5 107 31.8
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 3.8e-07 58.5 107 31.8


User provided reference genes

Program Settings