Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G44230 Arabidopsis thaliana HOM05D007886 ORTHO05D031309 5.4e-113 411.0 205 100.0
AL5G22310 Arabidopsis lyrata HOM05D007886 ORTHO05D031309 9.9e-91 337.0 204 82.4
Sp5g17090 Schrenkiella parvula HOM05D007886 ORTHO05D031309 1.7e-58 229.9 202 60.9
AL6G33130 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 4.2e-17 92.4 178 37.6
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 9.5e-17 91.3 177 37.3
Carub.0006s1988 Capsella rubella HOM05D007886 ORTHO05D010538 8.0e-16 88.2 178 35.4
Carub.0006s1979 Capsella rubella HOM05D007886 ORTHO05D010538 1.4e-15 87.4 177 35.6
Carub.0006s1984 Capsella rubella HOM05D007886 ORTHO05D010538 2.3e-15 86.7 178 35.4
AL6G33170 Arabidopsis lyrata HOM05D007886 ORTHO05D017383 8.8e-15 84.7 194 34.0
BcaB01g04727 Brassica carinata HOM05D007886 ORTHO05D010538 1.7e-13 80.5 192 33.9
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 6.3e-13 78.6 151 37.7
Carub.0006s1982 Capsella rubella HOM05D007886 ORTHO05D017383 1.8e-12 77.0 170 31.2
A10p18620 Brassica napus HOM05D007886 ORTHO05D017383 2.4e-12 76.6 178 32.6
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 2.4e-12 76.6 178 33.1
BraA10t43941Z Brassica rapa HOM05D007886 ORTHO05D017383 3.1e-12 76.3 178 33.1
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 2.7e-11 73.2 177 31.6
BcaB01g04730 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-10 71.2 149 34.2
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-10 71.2 149 34.2
BcaB01g04736 Brassica carinata HOM05D007886 ORTHO05D010538 4.3e-09 65.9 119 36.1
Carub.0006s1991 Capsella rubella HOM05D007886 ORTHO05D017383 4.3e-09 65.9 173 32.9
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 4.7e-08 62.4 144 34.7
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 2.0e-06 57.0 144 34.0
CARHR191370 Cardamine hirsuta HOM05D007886 ORTHO05D017383 4.4e-06 55.8 167 29.3


User provided reference genes

Program Settings