Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 0.0e+00 1296.2 674 100.0
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.9e-224 782.3 743 62.4
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.1e-168 595.5 743 50.7
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-165 587.4 729 51.2
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-164 583.9 752 50.4
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.4e-164 582.4 739 50.3
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-163 580.9 750 49.6
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.2e-162 575.9 743 49.8
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.8e-161 571.6 749 49.3
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.6e-160 568.5 731 50.2
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.3e-159 566.2 730 49.3
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.0e-157 558.1 727 49.4
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.6e-151 538.9 748 48.0
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.8e-150 535.8 749 48.5
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.1e-149 533.1 728 47.9
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.0e-149 532.7 708 48.2
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.5e-146 522.3 752 47.5
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-145 521.2 752 46.7
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.0e-145 518.8 688 48.5
AL77U10020 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-127 460.7 701 43.9
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.7e-121 440.3 750 43.5
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 8.8e-120 435.3 611 47.1
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.7e-119 432.6 888 39.3
AT4G06688 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.8e-107 393.3 646 45.0
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-72 278.5 331 51.7
AT3G32190 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.1e-68 264.6 283 59.0
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-66 258.8 279 54.5
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 9.6e-58 229.2 542 36.2
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.1e-57 226.1 432 40.0
AT5G35604 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.9e-50 204.9 311 43.7
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.1e-49 201.4 135 78.5
AT3G32150 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.4e-48 198.7 235 51.9
AL8G10150 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 7.6e-47 193.0 253 51.0
AT5G33806 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.0e-44 183.3 186 55.4
AT3G32200 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.6e-43 179.9 143 70.6
AT3G33293 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.5e-30 136.7 107 68.2
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.2e-25 119.8 283 34.3
AT3G33393 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.5e-22 110.2 112 53.6
AT4G08097 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.2e-21 107.8 157 43.3
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 9.3e-21 106.3 96 53.1
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.5e-18 99.0 87 50.6
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.9e-16 90.1 125 41.6
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.0e-15 88.6 107 43.9
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.0e-14 86.3 97 45.4
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.7e-14 85.5 83 50.6
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 3.8e-14 84.3 88 44.3
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 6.5e-14 83.6 102 43.1
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-13 82.4 83 49.4
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.5e-13 81.6 84 45.2
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-12 79.3 77 51.9
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 1.4e-11 75.9 87 43.7
CARHR153510 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.8e-11 75.5 66 50.0
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 3.0e-11 74.7 676 24.6
CARHR181090 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.0e-11 74.7 83 43.4
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.1e-11 73.9 106 40.6
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 6.7e-11 73.6 330 27.6
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-10 72.4 84 42.9
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-10 72.4 649 23.9
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 9.7e-10 69.7 90 42.2
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 9.7e-10 69.7 325 26.8
CARHR150680 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.3e-09 69.3 63 54.0
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 1.4e-08 65.9 87 36.8
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 1.8e-08 65.5 153 33.3
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-08 65.5 87 35.6
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 1.8e-08 65.5 80 38.8
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 3.1e-08 64.7 87 35.6
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-08 64.3 106 34.9
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 6.9e-08 63.5 87 35.6
CARHR181790 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.9e-08 63.5 63 49.2
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 9.1e-08 63.2 102 31.4
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 1.2e-07 62.8 98 34.7
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 1.2e-07 62.8 87 35.6
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.2e-07 62.8 108 34.3
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.4e-07 61.2 90 33.3
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 3.4e-07 61.2 619 23.4
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 3.4e-07 61.2 80 38.8
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-07 60.8 79 36.7
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 5.9e-07 60.5 88 31.8
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 5.9e-07 60.5 80 36.2
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 5.9e-07 60.5 97 33.0
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 7.7e-07 60.1 90 33.3
AL3G49830 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 1.0e-06 59.7 86 34.9
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 1.0e-06 59.7 101 32.7
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 1.3e-06 59.3 76 36.8
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-06 58.9 94 34.0
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 1.7e-06 58.9 76 42.1
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-06 58.5 79 38.0
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 2.2e-06 58.5 80 38.8
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 2.9e-06 58.2 80 37.5
Thhalv10023163m.g Eutrema salsugineum HOM05D010629 ORTHO05D016863 2.9e-06 58.2 95 33.7
AL7G45790 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 5.0e-06 57.4 84 34.5
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 5.0e-06 57.4 83 41.0
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 6.5e-06 57.0 88 35.2
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 8.5e-06 56.6 83 39.8


User provided reference genes

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