Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.1e-170 603.2 313 100.0
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.2e-89 333.2 295 64.7
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.9e-80 303.5 316 58.9
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 4.9e-73 278.9 238 66.0
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 6.4e-73 278.5 309 52.8
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 1.8e-67 260.4 322 50.9
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 3.1e-59 233.0 213 60.1
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 4.6e-55 219.2 233 58.4
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-53 214.5 351 39.9
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.0e-51 206.1 184 62.0
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 4.4e-50 202.6 204 61.3
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 1.7e-49 200.7 307 45.0
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 1.6e-47 194.1 172 60.5
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 8.7e-46 188.3 184 57.6
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 2.5e-45 186.8 234 47.0
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 9.6e-45 184.9 222 49.5
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 9.6e-45 184.9 232 45.3
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 2.8e-44 183.3 232 44.8
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 6.2e-44 182.2 228 47.4
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 9.0e-43 178.3 214 49.1
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-42 176.0 294 41.8
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 2.2e-41 173.7 312 39.7
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 3.8e-41 172.9 211 46.4
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 4.9e-41 172.6 150 58.7
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 1.1e-40 171.4 218 45.4
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-40 171.0 211 46.0
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 9.3e-40 168.3 214 46.3
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 2.7e-39 166.8 212 45.8
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 4.6e-39 166.0 181 50.8
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 2.3e-38 163.7 312 40.7
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 1.5e-37 161.0 181 50.8
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 4.3e-37 159.5 205 48.3
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 6.2e-36 155.6 247 41.3
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 8.1e-36 155.2 212 45.3
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 8.1e-36 155.2 212 45.3
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 1.1e-35 154.8 212 45.8
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 2.4e-35 153.7 212 45.3
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 1.5e-34 151.0 247 40.9
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 1.5e-34 151.0 329 36.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-34 149.4 304 36.5
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.3e-33 147.9 205 44.4
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 6.4e-33 145.6 253 38.3
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 9.3e-32 141.7 198 45.5
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-30 137.1 210 44.3
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-30 136.7 166 48.2
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 3.0e-30 136.7 154 48.7
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 1.5e-29 134.4 158 50.6
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 1.3e-28 131.3 158 50.0
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 6.2e-28 129.0 204 40.2
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 2.4e-27 127.1 124 50.8
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-26 124.8 209 41.1
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 1.4e-24 117.9 148 50.0
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 1.4e-24 117.9 148 50.0
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-24 117.5 187 41.7
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.2e-24 116.7 77 71.4
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 3.5e-23 113.2 197 39.1
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.6e-23 112.8 77 70.1
AL3G47030 Arabidopsis lyrata HOM05D004230 ORTHO05D080770 3.9e-22 109.8 61 82.0
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 4.3e-21 106.3 104 50.0
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 1.6e-20 104.4 103 50.5
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-20 104.0 311 33.8
A05p20980 Brassica napus HOM05D004230 ORTHO05D041249 2.8e-20 103.6 169 42.0
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 1.8e-19 100.9 126 46.0
Carub.0007s3014 Capsella rubella HOM05D004230 ORTHO05D007976 2.4e-19 100.5 227 37.9
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-18 97.4 146 44.5
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 7.7e-18 95.5 198 37.4
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-17 94.7 166 40.4
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 4.2e-16 89.7 219 33.8
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 7.2e-16 89.0 176 35.8
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 1.6e-15 87.8 102 46.1
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 4.6e-15 86.3 119 48.7
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 4.6e-15 86.3 119 48.7
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 6.1e-15 85.9 120 48.3
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 6.1e-15 85.9 119 48.7
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 6.1e-15 85.9 119 48.7
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.0e-14 83.6 152 38.8
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 8.8e-14 82.0 217 34.1
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-13 80.9 116 47.4
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.7e-13 79.3 115 38.3
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 7.4e-13 79.0 218 32.1
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-12 78.2 145 41.4
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 1.7e-12 77.8 126 42.1
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 2.2e-12 77.4 84 48.8
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 1.8e-11 74.3 84 47.6
BraA06t27442Z Brassica rapa HOM05D004230 ORTHO05D007976 4.1e-11 73.2 56 64.3
C02p00020 Brassica napus HOM05D004230 ORTHO05D028081 9.1e-11 72.0 129 43.4
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-10 71.6 112 46.4
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 2.6e-10 70.5 91 39.6
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 3.4e-10 70.1 192 32.8
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.4e-10 70.1 122 38.5
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 7.7e-10 68.9 133 38.3
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 7.7e-10 68.9 44 72.7
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 7.7e-10 68.9 44 72.7
C05p40180 Brassica napus HOM05D035681 ORTHO05D028081 1.4e-08 64.7 62 48.4
C03p63400 Brassica napus HOM05D030526 ORTHO05D028078 4.2e-08 63.2 38 63.2
C04p25730 Brassica napus HOM05D030526 ORTHO05D028078 4.2e-08 63.2 41 58.5
BolC4t24235H Brassica oleracea HOM05D030526 ORTHO05D028078 4.2e-08 63.2 41 58.5
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 5.5e-08 62.8 110 39.1
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 9.4e-08 62.0 102 44.1
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 9.4e-08 62.0 194 28.9
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 2.1e-07 60.8 47 55.3
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 2.7e-07 60.5 198 26.3
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 1.0e-06 58.5 137 34.3
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-06 57.4 101 43.6
C03p81320 Brassica napus HOM05D004230 ORTHO05D028081 8.8e-06 55.5 54 50.0


User provided reference genes

Program Settings