Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 5.9e-104 380.9 203 100.0
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 1.8e-92 342.8 203 87.7
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 6.0e-48 194.9 198 57.1
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 5.1e-47 191.8 209 52.2
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 1.1e-46 190.7 202 52.5
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 1.5e-46 190.3 198 52.0
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.5e-46 189.5 204 53.9
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 3.3e-46 189.1 203 50.2
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 5.6e-46 188.3 204 53.9
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 9.6e-46 187.6 198 51.5
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 1.6e-45 186.8 198 51.5
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 1.6e-45 186.8 203 50.7
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 3.6e-45 185.7 202 52.0
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 3.6e-45 185.7 203 49.3
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 8.1e-45 184.5 201 51.2
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 1.1e-44 184.1 203 50.2
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.8e-44 183.3 204 50.5
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 4.0e-44 182.2 205 49.8
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 6.9e-44 181.4 212 50.0
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 1.5e-43 180.3 205 49.3
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 4.5e-43 178.7 198 50.0
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 7.6e-43 177.9 198 50.0
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 7.6e-43 177.9 204 47.5
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 2.2e-42 176.4 198 50.0
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 2.9e-42 176.0 198 47.5
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 2.9e-42 176.0 204 47.5
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 3.8e-42 175.6 201 48.3
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 4.9e-42 175.3 204 51.0
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 6.4e-42 174.9 201 47.8
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 8.4e-42 174.5 201 47.3
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 1.1e-41 174.1 204 47.5
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 4.2e-41 172.2 203 49.3
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 4.2e-41 172.2 201 48.3
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 5.5e-41 171.8 201 48.8
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 1.6e-40 170.2 205 47.8
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 1.6e-40 170.2 207 49.8
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 6.0e-40 168.3 203 47.8
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 7.9e-40 167.9 208 46.6
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 1.8e-39 166.8 203 48.3
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 2.3e-39 166.4 198 47.5
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 3.9e-39 165.6 203 46.3
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 4.3e-38 162.2 197 49.7
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 7.4e-38 161.4 203 45.8
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 1.6e-37 160.2 198 47.0
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 1.6e-37 160.2 198 47.0
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 2.8e-37 159.5 203 45.3
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 4.8e-37 158.7 198 48.0
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 1.4e-36 157.1 185 46.5
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 1.4e-36 157.1 202 44.6
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 6.9e-36 154.8 200 45.0
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 9.0e-36 154.5 202 45.5
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.5e-35 153.7 204 46.6
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 1.5e-35 153.7 198 43.4
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 3.4e-35 152.5 204 44.1
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 4.5e-35 152.1 198 48.0
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 7.6e-35 151.4 204 43.1
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 1.0e-34 151.0 208 42.3
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.7e-34 150.2 169 52.1
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 4.9e-34 148.7 204 43.6
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 9.3e-33 144.4 201 43.3
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 1.6e-32 143.7 156 51.3
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 7.9e-32 141.4 192 44.3
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 3.9e-31 139.0 158 47.5
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.1e-29 133.3 183 45.9
Aa31LG4G13290 Aethionema arabicum HOM05D008087 ORTHO05D010187 9.0e-20 101.3 119 52.9
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 3.4e-19 99.4 107 52.3
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 5.9e-19 98.6 107 50.5
PGR044G2297 Punica granatum HOM05D008087 ORTHO05D010187 1.2e-16 90.9 142 40.8
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 3.9e-15 85.9 102 45.1
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 2.2e-13 80.1 109 45.9
Zm00001eb005810 Zea mays HOM05D008087 ORTHO05D010187 1.4e-12 77.4 199 30.2
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 2.4e-12 76.6 83 45.8
HPP92_026302 Vanilla planifolia HOM05D008087 ORTHO05D010187 2.2e-10 70.1 197 33.5
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 7.9e-08 61.6 117 33.3
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 3.9e-07 59.3 64 45.3


User provided reference genes

Program Settings