Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 6.5e-43 177.2 101 100.0
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.9e-40 167.9 101 87.1
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.9e-40 167.9 101 87.1
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.1e-40 167.5 101 95.0
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 8.7e-40 166.8 101 86.1
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 3.3e-39 164.9 84 95.2
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 3.3e-39 164.9 84 95.2
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 3.3e-39 164.9 84 95.2
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.1e-38 162.2 98 83.7
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.1e-38 162.2 83 96.4
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 6.3e-38 160.6 101 80.2
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-37 159.1 84 92.9
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-37 159.1 84 92.9
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.8e-37 159.1 84 92.9
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.8e-37 159.1 84 92.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 2.4e-37 158.7 101 82.2
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 4.1e-37 157.9 84 91.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 5.3e-37 157.5 101 79.2
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 5.3e-37 157.5 82 93.9
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.5e-36 156.0 84 90.5
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 7.6e-36 153.7 84 88.1
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 5.0e-35 151.0 79 92.4
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.6e-33 146.0 83 88.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 6.1e-33 144.1 84 79.8
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.9e-31 139.0 82 82.9
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.9e-31 139.0 82 81.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.5e-31 138.7 82 78.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.3e-31 137.9 83 78.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 5.7e-31 137.5 82 80.5
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 5.7e-31 137.5 77 84.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.3e-30 136.3 84 77.4
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.3e-30 136.3 82 80.5
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.3e-30 136.3 82 80.5
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.3e-30 136.3 82 78.0
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.6e-30 136.0 82 76.8
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.6e-30 136.0 83 77.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.8e-30 135.2 83 78.3
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.8e-30 135.2 99 63.6
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.8e-30 135.2 79 79.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.8e-30 135.2 75 84.0
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 77.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 77.1
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 78.3
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 78.3
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 4.8e-30 134.4 82 79.3
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 6.3e-30 134.0 83 75.9
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 6.3e-30 134.0 82 76.8
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 8.2e-30 133.7 82 73.2
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 8.2e-30 133.7 82 78.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 8.2e-30 133.7 82 74.4
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.1e-29 133.3 83 75.9
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.4e-29 132.9 82 75.6
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.4e-29 132.9 84 72.6
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.4e-29 132.9 84 78.6
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.4e-29 132.9 83 77.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.8e-29 132.5 83 77.1
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.8e-29 132.5 82 79.3
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.8e-29 132.5 83 78.3
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.8e-29 132.5 83 78.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 2.4e-29 132.1 82 79.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.4e-29 132.1 82 75.6
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 3.1e-29 131.7 82 80.5
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 3.1e-29 131.7 82 79.3
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.1e-29 131.3 84 77.4
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.1e-29 131.3 82 74.4
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 5.3e-29 131.0 82 75.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 5.3e-29 131.0 82 75.6
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 5.3e-29 131.0 82 78.0
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 6.9e-29 130.6 82 78.0
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 9.0e-29 130.2 98 70.4
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 9.0e-29 130.2 81 71.6
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 9.0e-29 130.2 82 76.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 1.2e-28 129.8 82 76.8
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.2e-28 129.8 82 75.6
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.5e-28 129.4 82 75.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.5e-28 129.4 83 79.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.5e-28 129.4 83 79.5
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.0e-28 129.0 84 72.6
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.0e-28 129.0 83 77.1
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.0e-28 129.0 72 81.9
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 2.0e-28 129.0 83 75.9
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 2.6e-28 128.6 82 78.0
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.4e-28 128.3 66 93.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 4.5e-28 127.9 76 80.3
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 4.5e-28 127.9 78 75.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.0e-27 126.7 82 75.6
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.0e-27 126.7 78 78.2
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.3e-27 126.3 78 78.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 1.7e-27 125.9 82 74.4
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.2e-27 125.6 84 70.2
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.9e-27 125.2 84 70.2
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.9e-27 125.2 83 71.1
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 3.8e-27 124.8 70 84.3
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.8e-27 124.8 76 72.4
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.0e-27 124.4 91 71.4
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 5.0e-27 124.4 75 80.0
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 8.5e-27 123.6 75 77.3
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-26 123.2 79 78.5
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.9e-26 122.5 97 64.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.9e-26 122.5 78 75.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.5e-26 120.9 95 65.3
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 7.2e-26 120.6 70 78.6
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.2e-25 119.8 75 76.0
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.6e-25 119.4 105 60.0
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.7e-25 118.6 97 64.9
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 6.7e-24 114.0 67 80.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.1e-23 113.2 75 72.0
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.0e-23 112.5 66 80.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.3e-23 111.7 68 79.4
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.3e-23 111.7 68 77.9
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 9.7e-23 110.2 67 77.6
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 9.7e-23 110.2 66 78.8
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.7e-22 109.4 67 79.1
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 4.8e-22 107.8 66 80.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 8.2e-22 107.1 82 62.2
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 1.4e-21 106.3 65 78.5
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 2.4e-21 105.5 65 75.4
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.4e-21 105.5 85 64.7
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.2e-19 99.0 69 66.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 5.7e-15 84.3 70 55.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 5.7e-15 84.3 71 60.6
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 8.2e-14 80.5 47 78.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 8.2e-14 80.5 55 72.7
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.1e-13 80.1 64 56.2
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.8e-13 79.3 75 60.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-11 73.2 48 75.0
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-11 73.2 48 75.0
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-11 73.2 48 75.0
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.8e-11 71.6 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 5.0e-11 71.2 49 63.3
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 7.2e-10 67.4 48 62.5
BcaB01g03422 Brassica carinata HOM05D037851 ORTHO05D006822 4.8e-06 54.7 87 47.1
BcaB02g06981 Brassica carinata HOM05D037851 ORTHO05D006822 4.8e-06 54.7 87 47.1
BcaB02g06986 Brassica carinata HOM05D037851 ORTHO05D006822 4.8e-06 54.7 87 47.1
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 4.8e-06 54.7 74 43.2


User provided reference genes

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