Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 7.0e-163 577.4 285 100.0
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 2.9e-116 422.5 298 70.8
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 1.4e-115 420.2 307 69.1
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 6.7e-113 411.4 297 69.4
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 6.9e-110 401.4 328 64.3
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 5.8e-109 398.3 362 59.1
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 6.0e-106 388.3 334 61.7
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 4.3e-104 382.1 361 58.2
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-103 380.6 361 57.3
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 6.3e-103 378.3 361 57.1
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 5.7e-96 355.1 344 57.6
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 2.2e-95 353.2 344 57.3
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 2.0e-93 346.7 297 62.3
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 2.4e-78 296.6 331 49.5
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 3.5e-77 292.7 382 44.2
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-77 292.4 315 51.4
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.2e-76 290.0 298 54.4
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-74 284.3 333 48.6
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 2.7e-74 283.1 333 48.3
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 8.5e-68 261.5 250 57.6
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-66 257.7 285 53.3
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-65 253.4 174 72.4
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 6.8e-65 251.9 308 48.4
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 1.7e-63 247.3 291 48.1
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 2.8e-63 246.5 301 48.2
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 9.5e-59 231.5 354 41.5
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 3.6e-58 229.6 353 41.6
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 8.0e-58 228.4 322 45.3
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 1.8e-57 227.3 264 50.4
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 5.2e-57 225.7 283 48.4
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 1.2e-56 224.6 347 40.3
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 1.6e-53 214.2 344 39.0
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 2.0e-53 213.8 202 63.4
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.5e-53 212.6 316 41.1
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 6.6e-52 208.8 230 53.9
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-51 207.6 344 42.4
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 9.5e-51 204.9 225 49.8
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 6.1e-50 202.2 253 47.8
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 6.1e-50 202.2 253 47.8
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 8.0e-50 201.8 384 38.0
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 4.0e-49 199.5 225 49.8
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 6.8e-49 198.7 251 47.8
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 6.8e-49 198.7 251 47.8
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 8.9e-49 198.4 297 41.8
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 5.7e-48 195.7 338 39.9
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 9.8e-48 194.9 281 43.1
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 4.1e-46 189.5 227 50.2
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 1.2e-45 188.0 205 51.2
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 1.2e-45 188.0 205 51.2
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 3.5e-45 186.4 244 46.3
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 4.6e-45 186.0 192 53.1
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 1.0e-44 184.9 299 39.1
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 3.9e-44 183.0 326 37.1
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 1.1e-43 181.4 124 69.4
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 4.7e-42 176.0 262 42.4
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-41 174.5 284 39.1
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 5.2e-41 172.6 164 56.7
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-40 171.0 235 45.5
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 2.6e-40 170.2 203 50.2
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 3.4e-40 169.9 255 43.5
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 4.4e-40 169.5 266 40.6
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 5.8e-40 169.1 194 46.9
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.1e-38 164.9 262 39.7
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 2.4e-38 163.7 229 44.5
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 1.6e-37 161.0 204 48.0
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 6.0e-37 159.1 195 47.2
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 9.5e-35 151.8 205 44.4
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 8.1e-34 148.7 156 51.3
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.0e-33 146.4 225 39.6
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.0e-33 146.4 230 42.2
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.5e-32 144.4 156 49.4
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 2.9e-31 140.2 95 64.2
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 8.3e-31 138.7 157 47.1
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 3.2e-30 136.7 95 63.2
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 5.4e-30 136.0 246 37.8
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 9.2e-30 135.2 266 35.0
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-29 134.8 91 64.8
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 1.6e-29 134.4 146 52.7
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-28 131.3 156 45.5
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.9e-28 129.8 116 56.9
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 5.1e-28 129.4 150 45.3
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 1.9e-27 127.5 78 76.9
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.6e-27 125.9 73 86.3
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.1e-26 124.0 213 38.5
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 8.1e-26 122.1 218 39.4
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 1.1e-25 121.7 78 71.8
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.4e-25 121.3 339 30.4
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 5.2e-25 119.4 207 39.1
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-22 111.7 225 37.3
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.6e-21 107.8 213 38.0
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 2.7e-21 107.1 157 40.1
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 1.0e-20 105.1 300 30.7
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 1.7e-20 104.4 124 49.2
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 3.9e-20 103.2 78 62.8
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 1.1e-19 101.7 175 39.4
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 1.9e-19 100.9 78 61.5
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 7.3e-19 99.0 302 31.8
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 4.7e-18 96.3 170 38.2
AL1G50740 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 6.9e-17 92.4 47 93.6
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 6.9e-17 92.4 75 58.7
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 6.9e-17 92.4 115 47.8
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 6.9e-17 92.4 75 58.7
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 6.9e-17 92.4 78 57.7
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 8.9e-17 92.0 148 42.6
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-16 91.3 211 36.0
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 5.8e-16 89.4 117 39.3
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 2.2e-15 87.4 162 38.9
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.8e-15 86.7 125 39.2
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.8e-15 86.7 133 39.8
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 6.4e-15 85.9 78 55.1
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-15 85.9 78 55.1
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 6.4e-15 85.9 78 55.1
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 8.4e-15 85.5 271 28.8
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 1.1e-14 85.1 127 40.9
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 1.4e-14 84.7 167 38.3
BolC2t12233H Brassica oleracea HOM05D004230 ORTHO05D007976 4.2e-14 83.2 75 54.7
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 9.3e-14 82.0 68 58.8
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 7.8e-13 79.0 134 35.1
AT5G36080 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.0e-12 78.6 78 48.7
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 3.9e-12 76.6 45 73.3
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 1.1e-11 75.1 45 71.1
BolC3t20148H Brassica oleracea HOM05D004230 ORTHO05D007976 1.9e-11 74.3 70 52.9
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.3e-11 73.2 71 45.1
A05p20980 Brassica napus HOM05D004230 ORTHO05D041249 1.3e-10 71.6 157 35.7
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-10 71.6 47 66.0
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 6.2e-10 69.3 71 43.7
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 8.1e-10 68.9 46 63.0
Carub.0007s3014 Capsella rubella HOM05D004230 ORTHO05D007976 8.1e-10 68.9 173 32.4
CARHR113870 Cardamine hirsuta HOM05D004230 ORTHO05D007976 2.0e-08 64.3 64 50.0
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 3.4e-08 63.5 63 50.8
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-07 60.8 134 34.3
AL1G52170 Arabidopsis lyrata HOM05D004230 ORTHO05D080245 3.8e-07 60.1 119 27.7
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 3.8e-07 60.1 43 58.1
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 4.2e-06 56.6 94 38.3
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 4.2e-06 56.6 94 38.3


User provided reference genes

Program Settings