Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G30235 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.3e-91 339.7 169 100.0
AL3G40330 Arabidopsis lyrata HOM05D000254 ORTHO05D000165 3.3e-23 112.5 215 35.8
Oeu009938.1 Olea europaea HOM05D000254 ORTHO05D000165 1.9e-18 96.7 107 51.4
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.4e-18 96.3 168 37.5
Thhalv10012204m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 9.2e-18 94.4 159 44.0
CARHR150890 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.1e-17 93.2 59 66.1
Thhalv10029343m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.6e-16 88.2 132 41.7
CARHR216160 Cardamine hirsuta HOM05D000254 ORTHO05D000165 8.6e-16 87.8 187 36.9
Oeu054591.1 Olea europaea HOM05D000254 ORTHO05D000165 8.6e-16 87.8 107 48.6
Thhalv10001868m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.1e-15 87.4 200 33.0
Thhalv10023166m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.1e-15 87.4 74 54.1
CARHR286120 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.5e-15 87.0 71 54.9
Oeu024532.1 Olea europaea HOM05D000254 ORTHO05D000165 2.5e-15 86.3 107 49.5
Thhalv10027556m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.3e-15 85.5 200 31.5
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 5.6e-15 85.1 215 32.6
Oeu054769.1 Olea europaea HOM05D000254 ORTHO05D000165 5.6e-15 85.1 104 45.2
Thhalv10023932m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.3e-15 84.7 196 32.7
Thhalv10011093m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.6e-14 83.6 123 47.2
THA.LOC104824679 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.8e-14 82.8 215 33.0
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.8e-14 82.8 215 33.0
Oeu033029.1 Olea europaea HOM05D000254 ORTHO05D000165 3.6e-14 82.4 109 45.9
Thhalv10002330m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.2e-14 81.6 200 32.5
Oeu020658.1 Olea europaea HOM05D000254 ORTHO05D000165 6.2e-14 81.6 101 48.5
Oeu043213.1 Olea europaea HOM05D000254 ORTHO05D000165 8.1e-14 81.3 99 45.5
Oeu057869.1 Olea europaea HOM05D000254 ORTHO05D000165 8.1e-14 81.3 101 48.5
Oeu058268.1 Olea europaea HOM05D000254 ORTHO05D000165 8.1e-14 81.3 101 49.5
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.1e-13 80.9 200 31.0
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.4e-13 80.5 223 29.6
Oeu034503.1 Olea europaea HOM05D000254 ORTHO05D000165 1.4e-13 80.5 120 41.7
CARHR293270 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.3e-13 79.7 200 31.5
AT3G29765 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 3.1e-13 79.3 215 31.6
ECA236G2413 Erigeron canadensis HOM05D000254 ORTHO05D000165 6.8e-13 78.2 200 30.0
ECA238G3762 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.5e-12 77.0 74 50.0
Thhalv10028186m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.5e-12 77.0 59 52.5
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.0e-12 76.6 181 34.8
THA.LOC104804666 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.0e-12 76.6 74 51.4
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.0e-12 76.6 74 51.4
ECA233G4777 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-12 76.3 201 28.9
THA.LOC104799914 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.6e-12 76.3 74 50.0
AT3G29763 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 4.4e-12 75.5 84 50.0
AT4G09660 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.3e-11 73.9 84 47.6
CARHR261190 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.3e-11 73.9 185 31.4
Thhalv10012191m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.3e-11 73.9 146 37.7
Oeu007639.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-11 73.9 98 42.9
Oeu007643.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-11 73.9 99 42.4
FvH4_4g08751 Fragaria vesca HOM05D000254 ORTHO05D000165 4.9e-11 72.0 184 29.3
Thhalv10019469m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 8.3e-11 71.2 69 49.3
AT3G29450 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.4e-10 70.5 77 44.2
Thhalv10002181m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.4e-10 70.5 67 50.7
arahy.Tifrunner.gnm1.ann1.YB8GZZ Arachis hypogaea HOM05D000254 ORTHO05D000165 2.4e-10 69.7 118 37.3
arahy.Tifrunner.gnm1.ann1.IEL4E6 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.1e-10 68.9 141 32.6
QL93p2004_0098 Quercus lobata HOM05D000254 ORTHO05D000165 5.4e-10 68.6 124 36.3
Glyma.18G159600 Glycine max HOM05D000254 ORTHO05D000165 9.2e-10 67.8 178 29.8
AT1G41920 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.2e-09 67.4 77 42.9
ECA233G5552 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.6e-09 67.0 200 30.5
ECA240G3154 Erigeron canadensis HOM05D000164 ORTHO05D000096 3.5e-09 65.9 248 26.2
ECA247G1176 Erigeron canadensis HOM05D000254 ORTHO05D000165 4.6e-09 65.5 68 44.1
MD12G1083800 Malus domestica HOM05D000254 ORTHO05D000165 6.0e-09 65.1 131 35.9
Oeu044534.1 Olea europaea HOM05D000254 ORTHO05D000165 6.0e-09 65.1 101 43.6
Lj1g0009549 Lotus japonicus HOM05D000254 ORTHO05D000165 1.7e-08 63.5 121 35.5
arahy.Tifrunner.gnm1.ann1.63HC0C Arachis hypogaea HOM05D000254 ORTHO05D000165 2.3e-08 63.2 128 32.8
arahy.Tifrunner.gnm1.ann1.Y6Z520 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.3e-08 63.2 103 40.8
CiPaw.09G129800 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.3e-08 63.2 101 36.6
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.0e-08 62.8 74 43.2
Lj3g0007908 Lotus japonicus HOM05D000254 ORTHO05D000165 3.0e-08 62.8 180 28.9
CARHR180590 Cardamine hirsuta HOM05D000254 ORTHO05D000165 6.6e-08 61.6 39 82.1
Ciclev10003272m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.6e-08 61.6 79 41.8
Ciclev10003597m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.6e-08 61.6 79 41.8
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.6e-08 61.6 79 41.8
PSO478G3137 Papaver somniferum HOM05D000254 ORTHO05D000165 6.6e-08 61.6 73 43.8
Aqoxy1G03125 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 8.6e-08 61.2 103 35.0
PSO173G0048 Papaver somniferum HOM05D000254 ORTHO05D000165 2.5e-07 59.7 146 30.8
Hund17542 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.3e-07 59.3 181 28.2
CARHR225750 Cardamine hirsuta HOM05D000254 ORTHO05D000165 4.3e-07 58.9 154 33.1
Lj6g0015897 Lotus japonicus HOM05D000254 ORTHO05D000165 4.3e-07 58.9 122 32.8
PSO063G2094 Papaver somniferum HOM05D000254 ORTHO05D000165 4.3e-07 58.9 104 36.5
PSO063G4322 Papaver somniferum HOM05D000254 ORTHO05D000165 4.3e-07 58.9 178 31.5
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.6e-07 58.5 58 46.6
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.6e-07 58.5 79 40.5
Ciclev10018973m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.6e-07 58.5 58 51.7
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.6e-07 58.5 58 46.6
Thhalv10022494m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.6e-07 58.5 32 75.0
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.3e-07 58.2 179 30.2
CARHR035170 Cardamine hirsuta HOM05D000254 ORTHO05D000165 7.3e-07 58.2 38 63.2
Thhalv10012261m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.3e-07 58.2 39 79.5
Hund24558 Selenicereus undatus HOM05D000254 ORTHO05D010315 7.3e-07 58.2 71 43.7
THA.LOC104804546 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 7.3e-07 58.2 107 43.9
Glyma.11G216600 Glycine max HOM05D000254 ORTHO05D000165 9.5e-07 57.8 73 38.4
Lj4g0018617 Lotus japonicus HOM05D000254 ORTHO05D000165 9.5e-07 57.8 139 33.1
Manes.10G094000 Manihot esculenta HOM05D000254 ORTHO05D000165 1.2e-06 57.4 202 27.7
Oeu028032.1 Olea europaea HOM05D000254 ORTHO05D000165 1.2e-06 57.4 66 43.9
THA.LOC104804719 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 1.2e-06 57.4 39 76.9
Ciclev10006709m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.6e-06 57.0 58 50.0
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 1.6e-06 57.0 189 28.6
Oeu001455.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-06 57.0 66 42.4
CSS0012288 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.1e-06 56.6 84 36.9
Lj3g0023822 Lotus japonicus HOM05D000254 ORTHO05D000165 2.1e-06 56.6 206 25.7
Manes.12G066306 Manihot esculenta HOM05D000254 ORTHO05D000165 2.1e-06 56.6 202 27.2
Manes.16G054463 Manihot esculenta HOM05D000254 ORTHO05D000165 2.1e-06 56.6 202 27.2
Lj2g0009562 Lotus japonicus HOM05D000254 ORTHO05D000165 2.8e-06 56.2 186 25.8
Manes.16G056300 Manihot esculenta HOM05D000254 ORTHO05D000165 2.8e-06 56.2 202 26.7
Hund04918 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.8e-06 56.2 73 43.8
Thhalv10023867m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.6e-06 55.8 168 26.2
LjContig00357g0001689 Lotus japonicus HOM05D000254 ORTHO05D000165 3.6e-06 55.8 73 37.0
Manes.08G061350 Manihot esculenta HOM05D000254 ORTHO05D000165 3.6e-06 55.8 202 27.2
TWI75G0257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.6e-06 55.8 200 27.5
arahy.Tifrunner.gnm1.ann1.Q3MTCJ Arachis hypogaea HOM05D000254 ORTHO05D000165 4.7e-06 55.5 60 43.3
arahy.Tifrunner.gnm1.ann1.T4IM50 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.7e-06 55.5 60 43.3
CSS0000515 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.7e-06 55.5 73 43.8
CSS0004379 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.7e-06 55.5 82 37.8
CSS0031583 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.7e-06 55.5 82 37.8
TWI12G0599 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.7e-06 55.5 119 31.9
CSS0026595 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.2e-06 55.1 65 44.6
Thhalv10012171m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.2e-06 55.1 35 80.0
Glyma.04G110650 Glycine max HOM05D000254 ORTHO05D000165 6.2e-06 55.1 73 38.4
Glyma.13G083900 Glycine max HOM05D000254 ORTHO05D000165 6.2e-06 55.1 218 24.8
Manes.01G190751 Manihot esculenta HOM05D000254 ORTHO05D000165 6.2e-06 55.1 202 27.2
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 6.2e-06 55.1 66 42.4
Hund26328 Selenicereus undatus HOM05D000254 ORTHO05D000165 6.2e-06 55.1 201 26.4
arahy.Tifrunner.gnm1.ann1.2K1FKK Arachis hypogaea HOM05D000254 ORTHO05D000165 8.1e-06 54.7 75 38.7
arahy.Tifrunner.gnm1.ann1.ZHV4UG Arachis hypogaea HOM05D000254 ORTHO05D000165 8.1e-06 54.7 60 43.3
CARHR292670 Cardamine hirsuta HOM05D000254 ORTHO05D000165 8.1e-06 54.7 33 69.7
ECA233G1917 Erigeron canadensis HOM05D000254 ORTHO05D000165 8.1e-06 54.7 58 55.2
Manes.10G056233 Manihot esculenta HOM05D000254 ORTHO05D000165 8.1e-06 54.7 202 27.2
QL03p035115 Quercus lobata HOM05D000254 ORTHO05D000165 8.1e-06 54.7 59 40.7
QL08p029111 Quercus lobata HOM05D000254 ORTHO05D000165 8.1e-06 54.7 59 40.7
Hund09962 Selenicereus undatus HOM05D000254 ORTHO05D000165 8.1e-06 54.7 201 26.4
TPR.G18993 Trifolium pratense HOM05D000254 ORTHO05D000165 8.1e-06 54.7 59 39.0
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 8.1e-06 54.7 32 68.8


User provided reference genes

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