Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 1.2e-48 196.1 92 100.0
Carub.0012s0017 Capsella rubella HOM05D007462 ORTHO05D011074 2.1e-24 115.5 74 68.9
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 9.8e-22 106.7 82 58.5
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 8.3e-21 103.6 74 58.1
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-20 103.2 74 56.8
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 1.4e-20 102.8 87 51.7
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 3.1e-20 101.7 75 57.3
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 5.4e-20 100.9 81 59.3
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 5.4e-20 100.9 81 59.3
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 1.6e-19 99.4 74 55.4
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 1.6e-19 99.4 74 55.4
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.6e-19 99.4 87 47.1
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 1.6e-19 99.4 74 55.4
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 2.7e-19 98.6 74 55.4
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 4.5e-19 97.8 74 54.1
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 5.9e-19 97.4 87 48.3
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 5.9e-19 97.4 87 50.6
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 7.7e-19 97.1 74 54.1
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 7.7e-19 97.1 74 54.1
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 1.0e-18 96.7 87 48.3
BcaC04g22963 Brassica carinata HOM05D007462 ORTHO05D011074 1.0e-18 96.7 72 55.6
BolC9t54236H Brassica oleracea HOM05D007462 ORTHO05D011074 1.0e-18 96.7 72 55.6
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-18 96.3 87 49.4
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-17 93.2 74 51.4
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-17 92.8 73 49.3
CARHR258030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.5e-17 92.8 86 48.8
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 4.2e-17 91.3 82 47.6
CARHR217030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 7.2e-17 90.5 78 51.3
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 1.6e-16 89.4 72 51.4
BcaC09g50767 Brassica carinata HOM05D007462 ORTHO05D011074 4.7e-16 87.8 70 51.4
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 1.4e-15 86.3 73 43.8
BcaC04g23556 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-14 83.2 74 50.0
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 1.5e-14 82.8 78 47.4
BolC7t44542H Brassica oleracea HOM05D007462 ORTHO05D011074 9.2e-12 73.6 45 64.4
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.5e-11 71.2 69 44.9
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.5e-11 71.2 69 44.9
BcaC04g20023 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-10 69.3 73 39.7
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 2.3e-10 68.9 75 37.3
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 2.9e-10 68.6 79 40.5
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 6.6e-10 67.4 66 43.9
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.9e-09 65.9 75 40.0
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 2.5e-09 65.5 66 45.5
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-09 65.5 70 48.6
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 2.5e-09 65.5 72 36.1
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 2.5e-09 65.5 72 36.1
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.5e-09 65.5 65 41.5
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 3.3e-09 65.1 72 38.9
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 4.3e-09 64.7 81 33.3
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 4.3e-09 64.7 72 36.1
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 4.3e-09 64.7 81 33.3
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 4.3e-09 64.7 72 38.9
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 5.6e-09 64.3 72 33.3
BolC3t21233H Brassica oleracea HOM05D007462 ORTHO05D011074 7.3e-09 63.9 74 41.9
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 9.5e-09 63.5 86 37.2
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 9.5e-09 63.5 81 32.1
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 9.5e-09 63.5 72 33.3
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-08 63.2 81 37.0
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-08 63.2 77 35.1
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-08 63.2 60 45.0
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.2e-08 63.2 81 35.8
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 2.1e-08 62.4 72 34.7
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 2.8e-08 62.0 69 39.1
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 2.8e-08 62.0 78 35.9
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-08 62.0 81 32.1
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-08 62.0 79 34.2
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 2.8e-08 62.0 61 44.3
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 2.8e-08 62.0 79 36.7
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-08 61.6 70 40.0
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 3.6e-08 61.6 81 33.3
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 3.6e-08 61.6 81 33.3
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 3.6e-08 61.6 72 34.7
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.6e-08 61.6 61 44.3
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 4.7e-08 61.2 79 34.2
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 4.7e-08 61.2 75 38.7
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.7e-08 61.2 65 40.0
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 6.1e-08 60.8 76 32.9
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 6.1e-08 60.8 61 45.9
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 8.0e-08 60.5 67 41.8
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 8.0e-08 60.5 81 35.8
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 8.0e-08 60.5 81 35.8
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 1.0e-07 60.1 61 45.9
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-07 60.1 74 32.4
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-07 60.1 74 32.4
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 1.0e-07 60.1 78 37.2
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 1.0e-07 60.1 73 31.5
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 1.0e-07 60.1 73 39.7
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-07 59.7 58 41.4
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 1.4e-07 59.7 73 35.6
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-07 59.3 57 47.4
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-07 59.3 78 38.5
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-07 59.3 78 38.5
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 1.8e-07 59.3 73 34.2
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 1.8e-07 59.3 65 41.5
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.8e-07 59.3 66 39.4
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.8e-07 59.3 78 37.2
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 2.3e-07 58.9 54 40.7
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 2.3e-07 58.9 54 40.7
BcaC06g35605 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-07 58.9 81 32.1
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 2.3e-07 58.9 51 47.1
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 2.3e-07 58.9 73 31.5
BcaB04g20307 Brassica carinata HOM05D007462 ORTHO05D002086 3.0e-07 58.5 50 44.0
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 3.0e-07 58.5 79 40.5
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 3.0e-07 58.5 76 36.8
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 3.0e-07 58.5 77 35.1
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 3.0e-07 58.5 73 34.2
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 3.0e-07 58.5 77 35.1
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 3.0e-07 58.5 73 34.2
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 3.0e-07 58.5 53 43.4
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 4.0e-07 58.2 78 37.2
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 4.0e-07 58.2 78 37.2
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 4.0e-07 58.2 56 44.6
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-07 58.2 72 36.1
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-07 58.2 73 34.2
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 4.0e-07 58.2 81 30.9
C09p18630 Brassica napus HOM05D059132 ORTHO05D041339 4.0e-07 58.2 46 54.3
BolC2t09536H Brassica oleracea HOM05D000675 ORTHO05D002086 4.0e-07 58.2 58 39.7
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 5.2e-07 57.8 56 46.4
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 5.2e-07 57.8 73 39.7
BraA03t15123Z Brassica rapa HOM05D000675 ORTHO05D002086 5.2e-07 57.8 89 29.2
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 5.2e-07 57.8 56 46.4
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 6.8e-07 57.4 73 34.2
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 6.8e-07 57.4 60 43.3
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 6.8e-07 57.4 82 32.9
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 6.8e-07 57.4 82 32.9
CARHR257150 Cardamine hirsuta HOM05D000675 ORTHO05D002086 6.8e-07 57.4 77 33.8
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 8.9e-07 57.0 57 38.6
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 8.9e-07 57.0 73 30.1
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 8.9e-07 57.0 51 37.3
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 56 44.6
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 56 44.6
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 1.2e-06 56.6 66 33.3
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-06 56.6 75 34.7
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 57 45.6
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 57 45.6
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 58 43.1
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-06 56.6 81 29.6
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.2e-06 56.6 56 46.4
CARHR117010 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.2e-06 56.6 51 52.9
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 56.2 51 41.2
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-06 56.2 95 33.7
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 56.2 66 33.3
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 56.2 66 33.3
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-06 56.2 77 33.8
BcaC07g36914 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-06 56.2 88 27.3
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 56.2 73 30.1
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-06 56.2 77 35.1
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-06 56.2 77 35.1
BolC8t46873H Brassica oleracea HOM05D000675 ORTHO05D002086 1.5e-06 56.2 89 28.1
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 1.5e-06 56.2 73 30.1
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 1.5e-06 56.2 57 47.4
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-06 55.8 68 36.8
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-06 55.8 66 33.3
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-06 55.8 77 33.8
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-06 55.8 75 32.0
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-06 55.8 66 33.3
BcaC06g36483 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-06 55.8 68 30.9
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 2.0e-06 55.8 73 30.1
BolC9t54759H Brassica oleracea HOM05D059132 ORTHO05D041339 2.0e-06 55.8 46 54.3
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 2.0e-06 55.8 51 37.3
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-06 55.5 77 31.2
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 2.6e-06 55.5 77 39.0
Carub.0003s2743 Capsella rubella HOM05D000675 ORTHO05D002086 2.6e-06 55.5 74 33.8
BcaB07g32446 Brassica carinata HOM05D007462 ORTHO05D092196 3.4e-06 55.1 73 32.9
BcaC03g15871 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-06 55.1 38 57.9
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 3.4e-06 55.1 52 40.4
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 3.4e-06 55.1 52 40.4
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 3.4e-06 55.1 52 40.4
BolC6t38866H Brassica oleracea HOM05D000675 ORTHO05D002086 3.4e-06 55.1 84 28.6
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 3.4e-06 55.1 56 37.5
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.4e-06 54.7 70 37.1
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.4e-06 54.7 70 37.1
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.4e-06 54.7 70 37.1
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 4.4e-06 54.7 55 45.5
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 4.4e-06 54.7 59 40.7
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 4.4e-06 54.7 65 36.9
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 4.4e-06 54.7 56 42.9
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 4.4e-06 54.7 88 28.4
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 5.7e-06 54.3 69 40.6
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 5.7e-06 54.3 81 29.6
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.7e-06 54.3 91 33.0
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 7.5e-06 53.9 56 35.7
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 7.5e-06 53.9 83 31.3
BcaC06g35366 Brassica carinata HOM05D000675 ORTHO05D002086 7.5e-06 53.9 78 32.1
BcaC09g51679 Brassica carinata HOM05D000675 ORTHO05D002086 7.5e-06 53.9 89 27.0
C06p13560 Brassica napus HOM05D000675 ORTHO05D032734 7.5e-06 53.9 86 32.6
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-06 53.9 72 36.1
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-06 53.9 82 35.4
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 9.8e-06 53.5 88 29.5
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-06 53.5 70 35.7
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 9.8e-06 53.5 77 32.5
BolC5t31613H Brassica oleracea HOM05D000675 ORTHO05D002086 9.8e-06 53.5 79 34.2
BolC5t33625H Brassica oleracea HOM05D000675 ORTHO05D002086 9.8e-06 53.5 58 36.2
CARHR263710 Cardamine hirsuta HOM05D000675 ORTHO05D002086 9.8e-06 53.5 77 32.5
Rhsim02G0156200 Rhododendron simsii HOM05D020684 ORTHO05D000309 9.8e-06 53.5 67 38.8


User provided reference genes

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