Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 5.2e-229 797.3 397 100.0
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.8e-213 745.7 397 92.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 2.4e-194 682.2 399 86.2
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.4e-194 682.2 396 86.1
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 9.2e-194 680.2 401 84.5
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 9.2e-194 680.2 401 84.5
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.8e-189 666.0 396 84.6
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.8e-189 666.0 396 84.6
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 2.0e-188 662.5 403 83.1
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 2.2e-187 659.1 393 85.0
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.7e-176 622.9 393 80.4
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 3.4e-172 608.6 403 77.7
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 1.6e-169 599.7 404 74.8
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.3e-152 542.7 374 71.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 8.7e-152 540.8 374 72.2
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 4.3e-151 538.5 351 73.2
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 8.2e-150 534.3 388 68.3
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 8.2e-150 534.3 399 66.9
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.4e-148 528.9 392 67.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.8e-147 525.4 402 65.2
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.4e-146 523.5 390 68.2
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.2e-146 522.3 390 67.7
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.2e-145 520.4 346 73.1
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 4.6e-145 518.5 398 64.3
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.8e-144 516.5 351 70.7
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.8e-144 516.5 418 65.3
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 2.3e-144 516.2 402 63.9
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 8.8e-144 514.2 344 70.1
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 8.8e-144 514.2 383 66.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.5e-143 512.7 386 68.4
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 3.3e-143 512.3 339 70.8
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 4.3e-143 511.9 356 68.0
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 7.4e-143 511.1 395 63.8
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.7e-142 510.0 351 70.1
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 2.2e-142 509.6 382 66.5
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 3.7e-142 508.8 344 71.8
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.2e-142 507.7 415 64.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.1e-141 507.3 399 64.2
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.1e-141 507.3 364 69.2
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.4e-141 506.9 386 66.1
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 3.1e-141 505.8 348 69.3
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 4.1e-141 505.4 384 66.9
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 4.1e-141 505.4 384 66.9
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.3e-141 505.0 386 66.1
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 9.1e-141 504.2 393 64.1
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 2.0e-140 503.1 345 69.3
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 2.0e-140 503.1 364 67.3
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 4.5e-140 501.9 346 70.2
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 7.7e-140 501.1 395 64.1
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 7.7e-140 501.1 411 63.0
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 7.7e-140 501.1 408 63.2
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.3e-139 500.4 346 68.8
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.3e-139 500.4 368 66.0
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 3.8e-139 498.8 396 63.9
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 6.5e-139 498.0 396 63.4
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 8.5e-139 497.7 388 64.9
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 8.5e-139 497.7 383 62.9
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 8.5e-139 497.7 358 67.0
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.5e-138 496.1 358 69.0
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.5e-138 496.1 409 63.3
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 2.5e-138 496.1 376 66.5
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 3.2e-138 495.7 356 68.3
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 4.2e-138 495.4 384 64.6
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 5.5e-138 495.0 410 62.7
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 9.4e-138 494.2 388 64.4
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 2.7e-137 492.7 344 68.9
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.6e-137 492.3 342 69.6
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 6.1e-137 491.5 356 67.4
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 3.0e-136 489.2 389 64.3
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.0e-136 489.2 354 67.8
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 3.9e-136 488.8 387 64.6
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 4.4e-135 485.3 394 63.7
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 5.7e-135 485.0 363 66.4
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 7.4e-135 484.6 380 63.9
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.3e-134 483.8 343 66.5
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.7e-134 483.4 376 62.5
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.4e-133 480.3 349 66.8
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 5.3e-133 478.4 256 89.5
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 7.0e-133 478.0 346 65.9
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.5e-132 476.9 319 72.1
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 1.3e-131 473.8 318 70.8
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 2.2e-131 473.0 395 60.3
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 8.5e-131 471.1 414 58.2
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.4e-130 470.3 310 71.6
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 4.2e-130 468.8 344 65.1
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.2e-129 467.2 322 72.0
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 2.7e-129 466.1 370 63.2
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 1.0e-128 464.2 350 64.9
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 1.8e-128 463.4 345 66.1
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.8e-128 461.1 344 64.5
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.5e-127 460.3 363 62.0
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 7.4e-127 458.0 345 66.1
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.0e-120 437.6 350 62.9
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.3e-118 430.6 309 68.6
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 4.8e-118 428.7 297 71.4
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.1e-117 427.6 373 59.5
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 1.2e-103 380.9 286 66.4
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.7e-102 377.1 248 73.0
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 6.6e-99 365.2 291 61.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.9e-98 363.6 318 63.5
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 5.6e-98 362.1 330 59.4
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.7e-94 350.5 366 48.4
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 7.3e-90 335.1 282 61.7
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 4.9e-86 322.4 415 46.0
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.0e-84 315.5 209 71.8
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 8.1e-81 305.1 344 43.0
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.3e-75 287.7 338 44.4
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 4.6e-68 262.7 345 40.0
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.5e-58 231.1 183 58.5
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 3.3e-58 229.9 127 83.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 2.1e-36 157.5 175 47.4
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.5e-34 151.4 153 54.2
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-32 145.2 159 50.3
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 2.4e-32 144.1 101 69.3
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.9e-30 137.1 93 67.7
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.0e-27 127.1 97 66.0
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 4.7e-20 103.2 85 61.2
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.9e-14 84.0 51 68.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 5.7e-10 69.7 94 43.6


User provided reference genes

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