Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G29152 Arabidopsis thaliana HOM05D038527 ORTHO05D031337 1.5e-55 219.2 105 100.0
AL5G19050 Arabidopsis lyrata HOM05D038527 ORTHO05D031337 5.1e-35 151.0 108 74.1
Carub.0005s0787 Capsella rubella HOM05D038527 ORTHO05D031337 3.0e-19 98.6 106 56.6
Thhalv10005361m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 2.2e-17 92.4 111 53.2
BolC7t44325H Brassica oleracea HOM05D000889 ORTHO05D000693 1.4e-11 73.2 106 39.6
A04p11180 Brassica napus HOM05D000889 ORTHO05D000693 8.8e-11 70.5 105 40.0
Carub.0005s1254 Capsella rubella HOM05D000889 ORTHO05D000693 8.8e-11 70.5 108 38.0
BcaB07g30095 Brassica carinata HOM05D000889 ORTHO05D000693 1.2e-10 70.1 106 37.7
BcaC06g30881 Brassica carinata HOM05D000889 ORTHO05D000693 1.2e-10 70.1 106 37.7
A06p40110 Brassica napus HOM05D000889 ORTHO05D000693 2.6e-10 68.9 106 38.7
BraA06t26926Z Brassica rapa HOM05D000889 ORTHO05D000693 2.6e-10 68.9 106 38.7
CARHR214570 Cardamine hirsuta HOM05D000889 ORTHO05D000693 4.4e-10 68.2 107 41.1
BcaC02g09632 Brassica carinata HOM05D000889 ORTHO05D000693 1.3e-09 66.6 105 39.0
C04p44890 Brassica napus HOM05D000889 ORTHO05D000693 1.3e-09 66.6 105 39.0
BolC4t26069H Brassica oleracea HOM05D000889 ORTHO05D000693 1.3e-09 66.6 105 39.0
Thhalv10010852m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 1.3e-09 66.6 107 43.0
Glyma.18G294200 Glycine max HOM05D000889 ORTHO05D000693 8.3e-09 63.9 88 42.0
BcaB06g27173 Brassica carinata HOM05D000889 ORTHO05D000693 1.4e-08 63.2 107 38.3
BcaC06g33673 Brassica carinata HOM05D000889 ORTHO05D000693 1.4e-08 63.2 107 37.4
C07p38040 Brassica napus HOM05D000889 ORTHO05D000693 1.4e-08 63.2 107 37.4
BolC7t44326H Brassica oleracea HOM05D000889 ORTHO05D000693 1.4e-08 63.2 107 37.4
Thhalv10028346m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 3.1e-08 62.0 107 41.1
AT5G38160 Arabidopsis thaliana HOM05D000889 ORTHO05D000693 4.1e-08 61.6 105 32.4
Glyma.02G088900 Glycine max HOM05D000889 ORTHO05D000693 4.1e-08 61.6 78 42.3
ATR0807G199 Amborella trichopoda HOM05D000889 ORTHO05D000693 5.4e-08 61.2 76 36.8
MD17G1248900 Malus domestica HOM05D000889 ORTHO05D000693 5.4e-08 61.2 75 40.0
AT5G38195 Arabidopsis thaliana HOM05D000889 ORTHO05D000693 7.0e-08 60.8 105 34.3
AT5G38180 Arabidopsis thaliana HOM05D000889 ORTHO05D000693 1.2e-07 60.1 106 34.0
CSS0014050 Camellia sinensis var. sinensis HOM05D000889 ORTHO05D000693 1.2e-07 60.1 72 40.3
Cfa015840 Carpinus fangiana HOM05D000889 ORTHO05D000693 1.2e-07 60.1 72 41.7
Haze_00650 Corylus avellana HOM05D000889 ORTHO05D000693 1.6e-07 59.7 72 40.3
Thhalv10028094m.g Eutrema salsugineum HOM05D000889 ORTHO05D000693 1.6e-07 59.7 107 39.3
Carub.0005s1255 Capsella rubella HOM05D000889 ORTHO05D000693 4.5e-07 58.2 105 35.2
CsaV3_4G010440 Cucumis sativus L. HOM05D000889 ORTHO05D000693 4.5e-07 58.2 102 35.3
Atru.chr1.1620 Acer truncatum HOM05D000889 ORTHO05D000693 5.9e-07 57.8 105 34.3
CAN.G82.18 Capsicum annuum HOM05D000889 ORTHO05D000693 2.9e-06 55.5 72 43.1
Carub.0005s1256 Capsella rubella HOM05D000889 ORTHO05D000693 5.0e-06 54.7 105 33.3
Os05g0550300 Oryza sativa ssp. japonica HOM05D000889 ORTHO05D000693 6.6e-06 54.3 76 35.5
Phvul.004G002600 Phaseolus vulgaris HOM05D000889 ORTHO05D000693 8.6e-06 53.9 103 33.0


User provided reference genes

Program Settings