Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28925 Arabidopsis thaliana HOM05D003226 ORTHO05D082003 1.9e-133 479.2 248 100.0
Aa31LG2G4270 Aethionema arabicum HOM05D003226 ORTHO05D005723 5.0e-12 75.9 85 55.3
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 5.0e-12 75.9 95 51.6
C07p37860 Brassica napus HOM05D003226 ORTHO05D005723 6.5e-12 75.5 95 51.6
BolC7t44308H Brassica oleracea HOM05D003226 ORTHO05D005723 6.5e-12 75.5 95 51.6
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 1.1e-11 74.7 89 53.9
BcaC06g33656 Brassica carinata HOM05D003226 ORTHO05D005723 1.9e-11 73.9 95 50.5
A06p40240 Brassica napus HOM05D003226 ORTHO05D005723 1.9e-11 73.9 95 50.5
BraA06t26939Z Brassica rapa HOM05D003226 ORTHO05D005723 1.9e-11 73.9 95 50.5
Thhalv10003529m.g Eutrema salsugineum HOM05D003226 ORTHO05D005723 1.4e-09 67.8 85 52.9
CSS0044326 Camellia sinensis var. sinensis HOM05D003226 ORTHO05D005723 3.0e-09 66.6 93 47.3
CARHR037400 Cardamine hirsuta HOM05D003226 ORTHO05D005723 3.9e-09 66.2 83 53.0
Ciclev10010934m.g Citrus clementina HOM05D003226 ORTHO05D005723 2.0e-08 63.9 94 44.7
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 3.3e-08 63.2 82 51.2
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 5.7e-08 62.4 96 40.6
Manes.02G046500 Manihot esculenta HOM05D003226 ORTHO05D005723 7.4e-08 62.0 109 38.5
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 9.7e-08 61.6 96 40.6
Dinv05919 Davidia involucrata HOM05D003226 ORTHO05D005723 9.7e-08 61.6 96 41.7
Potri.017G083200 Populus trichocarpa HOM05D003226 ORTHO05D005723 1.3e-07 61.2 88 40.9
Rhsim10G0039000 Rhododendron simsii HOM05D003226 ORTHO05D005723 1.3e-07 61.2 96 42.7
Gohir.A09G016100 Gossypium hirsutum HOM05D003226 ORTHO05D005723 1.7e-07 60.8 93 41.9
MD02G1198100 Malus domestica HOM05D003226 ORTHO05D005723 1.7e-07 60.8 96 41.7
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 1.7e-07 60.8 80 51.2
TAR375G0513 Trochodendron aralioides HOM05D003226 ORTHO05D005723 1.7e-07 60.8 96 39.6
Dinv33760 Davidia involucrata HOM05D003226 ORTHO05D005723 2.2e-07 60.5 96 40.6
Gorai.006G016800 Gossypium raimondii HOM05D003226 ORTHO05D005723 2.2e-07 60.5 93 40.9
Lalb_Chr21g0318701 Lupinus albus HOM05D003226 ORTHO05D005723 2.2e-07 60.5 147 34.0
Sabra17G0073700 Salix brachista HOM05D003226 ORTHO05D005723 2.2e-07 60.5 88 40.9
TWI34G0415 Tripterygium wilfordii HOM05D003226 ORTHO05D005723 2.8e-07 60.1 88 43.2
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 3.7e-07 59.7 148 30.4
Gohir.D09G014800 Gossypium hirsutum HOM05D003226 ORTHO05D005723 4.8e-07 59.3 94 40.4
Oeu035695.1 Olea europaea HOM05D003226 ORTHO05D005723 4.8e-07 59.3 88 38.6
Prupe.3G267300 Prunus persica HOM05D003226 ORTHO05D005723 4.8e-07 59.3 96 39.6
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 6.3e-07 58.9 96 38.5
FvH4_2g39941 Fragaria vesca HOM05D003226 ORTHO05D005723 6.3e-07 58.9 88 42.0
FAN15G3277 Fragaria x ananassa HOM05D003226 ORTHO05D005723 6.3e-07 58.9 88 42.0
Duzib187G0629 Durio zibethinus HOM05D003226 ORTHO05D005723 8.2e-07 58.5 94 40.4
Aqoxy293s003 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 1.1e-06 58.2 152 28.9
Aqoxy5G00799 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 1.1e-06 58.2 152 28.9
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 1.1e-06 58.2 94 40.4
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea HOM05D003226 ORTHO05D005723 1.1e-06 58.2 94 40.4
RcHm_v2.0_Chr6g0300801 Rosa chinensis HOM05D003226 ORTHO05D005723 1.1e-06 58.2 88 40.9
Nitab4.5_0000274g0210 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.4e-06 57.8 101 39.6
vmacro02215 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 1.4e-06 57.8 96 40.6
Hma1.2p1_0409F.1_g146951 Hydrangea macrophylla HOM05D003226 ORTHO05D005723 1.8e-06 57.4 88 40.9
Nitab4.5_0004308g0020 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.8e-06 57.4 94 40.4
FAN20G3149 Fragaria x ananassa HOM05D003226 ORTHO05D005723 2.4e-06 57.0 88 42.0
vmacro05694 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 3.1e-06 56.6 96 40.6
Lj4g0003862 Lotus japonicus HOM05D003226 ORTHO05D005723 4.1e-06 56.2 88 43.2
Thecc.04G082300 Theobroma cacao HOM05D003226 ORTHO05D005723 4.1e-06 56.2 93 39.8
ATR0605G313 Amborella trichopoda HOM05D003226 ORTHO05D005723 5.3e-06 55.8 86 40.7
QL02p063973 Quercus lobata HOM05D003226 ORTHO05D005723 5.3e-06 55.8 96 40.6
AUR62034416 Chenopodium quinoa HOM05D003226 ORTHO05D005723 7.0e-06 55.5 88 39.8
Peaxi162Scf00011g02911 Petunia axillaris HOM05D003226 ORTHO05D005723 7.0e-06 55.5 86 44.2
GSVIVG01011408001 Vitis vinifera HOM05D003226 ORTHO05D005723 7.0e-06 55.5 93 40.9
Haze_14528 Corylus avellana HOM05D003226 ORTHO05D005723 9.1e-06 55.1 96 39.6
DCAR_025375 Daucus carota HOM05D003226 ORTHO05D005723 9.1e-06 55.1 88 39.8


User provided reference genes

Program Settings