Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 9.8e-189 663.7 435 100.0
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 9.2e-179 630.6 435 95.4
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.8e-167 592.4 444 83.8
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 9.0e-150 534.3 492 73.4
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 2.1e-138 496.5 418 73.2
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 1.3e-135 487.3 470 67.0
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 2.1e-135 486.5 469 65.2
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 2.3e-121 439.9 479 64.5
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 9.7e-120 434.5 464 58.4
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 6.3e-119 431.8 467 65.7
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 9.4e-115 417.9 443 65.9
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 6.1e-106 388.7 453 61.6
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 2.3e-105 386.7 453 61.1
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 1.1e-104 384.4 441 59.0
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 1.5e-104 384.0 458 57.4
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 5.3e-102 375.6 423 59.3
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 2.0e-101 373.6 471 57.3
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 1.8e-97 360.5 500 52.4
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 2.3e-97 360.1 500 52.6
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 3.7e-79 299.7 579 47.2
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 1.2e-77 294.7 442 47.7
BcaNung06844 Brassica carinata HOM05D008352 ORTHO05D011361 3.5e-61 240.0 379 49.1
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 1.0e-60 238.4 355 47.9
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 4.9e-55 219.5 481 45.9
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.3e-55 218.8 481 46.2
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.3e-55 218.8 481 46.2
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.9e-54 217.6 513 34.7
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 1.1e-46 191.8 191 53.4
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 1.6e-45 188.0 193 51.8
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 2.1e-45 187.6 191 51.3
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 2.0e-40 171.0 191 48.2
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 4.4e-40 169.9 187 47.6
BcaB06g27388 Brassica carinata HOM05D008352 ORTHO05D014403 1.9e-38 164.5 188 48.4
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 4.2e-38 163.3 187 48.7
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 4.2e-38 163.3 187 48.7
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 5.4e-38 162.9 188 48.9
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 9.3e-38 162.2 154 60.4
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 1.6e-37 161.4 187 48.1
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 1.6e-37 161.4 187 48.1
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 1.7e-36 157.9 151 59.6
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 2.3e-36 157.5 151 59.6
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 2.3e-36 157.5 151 59.6
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.2e-29 135.2 153 56.9
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.0e-28 132.1 194 45.9
Thhalv10009470m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.7e-28 131.3 381 37.0
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.0e-28 130.6 188 43.6
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 2.8e-26 124.0 417 28.8
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 2.8e-26 124.0 178 53.4
BraA02t08646Z Brassica rapa HOM05D008352 ORTHO05D026834 2.0e-24 117.9 131 53.4
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 3.4e-24 117.1 149 50.3
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 3.4e-24 117.1 172 50.6
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.5e-24 116.7 151 49.7
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 5.8e-24 116.3 186 40.9
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.3e-23 115.2 151 46.4
AT5G48575 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 2.9e-23 114.0 96 67.7
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.1e-22 112.1 494 27.5
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.4e-22 111.7 151 46.4
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.3e-20 105.1 149 53.0
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 1.1e-19 102.1 197 34.0
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.9e-19 101.3 148 47.3
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 1.9e-19 101.3 149 45.0
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 4.3e-19 100.1 165 41.8
BraA02t08642Z Brassica rapa HOM05D008352 ORTHO05D024480 5.6e-19 99.8 119 52.9
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 7.4e-19 99.4 148 46.6
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 1.3e-18 98.6 169 40.2
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.8e-18 97.4 134 47.0
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.8e-18 97.4 134 47.0
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 8.1e-18 95.9 160 41.2
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 1.8e-17 94.7 148 43.2
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 1.8e-17 94.7 148 43.2
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 3.1e-17 94.0 177 36.2
AL8G21560 Arabidopsis lyrata HOM05D008352 ORTHO05D026834 5.3e-17 93.2 59 78.0
CARHR151800 Cardamine hirsuta HOM05D008352 ORTHO05D011361 5.3e-17 93.2 68 69.1
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 2.0e-16 91.3 151 40.4
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 2.0e-16 91.3 151 40.4
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 2.0e-16 91.3 151 40.4
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 2.0e-16 91.3 151 40.4
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 4.5e-16 90.1 168 38.7
A02p36470 Brassica napus HOM05D008352 ORTHO05D024480 4.5e-16 90.1 104 53.8
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 4.5e-16 90.1 168 38.7
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 1.0e-15 89.0 168 38.1
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 1.0e-15 89.0 157 38.9
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 2.9e-15 87.4 120 46.7
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.9e-15 87.4 137 43.8
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 3.8e-15 87.0 168 38.1
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-14 85.5 137 43.1
C02p55470 Brassica napus HOM05D008352 ORTHO05D026834 2.5e-14 84.3 135 43.7
BolC2t11603H Brassica oleracea HOM05D008352 ORTHO05D026834 2.5e-14 84.3 135 43.7
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 2.5e-14 84.3 152 40.1
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 3.2e-14 84.0 137 42.3
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 9.3e-14 82.4 168 36.9
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 9.3e-14 82.4 168 36.9
Thhalv10005404m.g Eutrema salsugineum HOM05D011893 ORTHO05D013967 6.0e-13 79.7 190 28.9
Sp2g17420 Schrenkiella parvula HOM05D011893 ORTHO05D013967 7.9e-13 79.3 184 28.8
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 2.3e-12 77.8 132 44.7
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 5.1e-12 76.6 125 43.2
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.3e-11 73.9 148 36.5
BcaC03g17568 Brassica carinata HOM05D008352 ORTHO05D024480 5.7e-11 73.2 119 42.9
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 1.3e-10 72.0 72 55.6
Aa31LG2G4450 Aethionema arabicum HOM05D011893 ORTHO05D013967 5.3e-09 66.6 189 25.9
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.7e-07 61.6 177 26.0
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 2.2e-07 61.2 185 25.9
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.4e-06 58.5 176 27.8
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 1.9e-06 58.2 186 25.8
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 2.5e-06 57.8 186 25.8
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.2e-06 57.4 132 30.3
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 5.5e-06 56.6 186 24.2
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 5.5e-06 56.6 186 24.2
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 7.2e-06 56.2 182 25.8
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 7.2e-06 56.2 183 27.9
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 9.3e-06 55.8 152 36.2


User provided reference genes

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