Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 0.0e+00 1382.1 2062 100.0
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 3.2e-104 385.2 716 60.2
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 1.7e-102 379.4 2120 66.0
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 1.3e-92 346.7 282 71.3
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 1.8e-91 342.8 355 60.0
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 2.0e-90 339.3 347 60.5
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 7.6e-90 337.4 339 61.4
Sp2g17420 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.9e-80 306.2 599 43.1
Thhalv10005404m.g Eutrema salsugineum HOM05D011893 ORTHO05D013967 8.2e-76 290.8 437 48.1
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 7.2e-72 277.7 339 54.9
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 7.2e-72 277.7 339 54.9
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 2.3e-70 272.7 286 65.4
Aa31LG2G4450 Aethionema arabicum HOM05D011893 ORTHO05D013967 2.2e-52 213.0 278 53.6
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 1.0e-46 194.1 175 62.3
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 3.4e-45 189.1 181 59.1
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.9e-24 120.2 212 41.5
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.0e-23 114.8 196 38.3
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.0e-23 114.8 196 38.3
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.0e-23 114.8 196 38.3
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 8.3e-20 104.8 169 40.8
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.4e-19 104.0 150 44.7
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 3.2e-19 102.8 157 40.8
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 4.1e-19 102.4 150 43.3
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 5.4e-19 102.1 166 39.2
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 9.2e-19 101.3 169 40.2
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 9.2e-19 101.3 169 40.2
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 3.9e-17 95.9 168 36.3
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 8.6e-17 94.7 152 40.8
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 8.6e-17 94.7 162 38.9
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.1e-16 94.4 157 40.1
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.5e-16 94.0 154 39.6
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 3.3e-16 92.8 179 37.4
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 3.3e-16 92.8 156 39.7
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 4.3e-16 92.4 174 35.6
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 5.6e-16 92.0 155 36.1
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 3.6e-15 89.4 175 35.4
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 3.6e-15 89.4 147 40.1
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 6.2e-15 88.6 178 37.6
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 6.2e-15 88.6 152 38.8
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 1.4e-14 87.4 178 36.5
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 4.0e-14 85.9 178 37.6
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 6.8e-14 85.1 152 36.8
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 1.2e-13 84.3 157 35.0
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 1.2e-13 84.3 172 34.3
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 1.2e-13 84.3 157 35.0
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 1.2e-13 84.3 157 35.0
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 1.2e-13 84.3 172 34.3
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 1.5e-13 84.0 187 34.2
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 1.5e-13 84.0 159 37.7
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 2.0e-13 83.6 150 37.3
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 3.4e-13 82.8 149 36.9
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 3.4e-13 82.8 149 36.9
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 3.4e-13 82.8 149 36.9
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 7.5e-13 81.6 137 39.4
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 2.2e-12 80.1 186 31.7
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 6.4e-12 78.6 176 34.1
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 6.4e-12 78.6 184 28.8
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.1e-11 77.8 155 32.3
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 1.4e-11 77.4 154 35.1
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.9e-11 77.0 147 34.7
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.9e-11 77.0 147 34.7
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 3.2e-11 76.3 148 36.5
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 5.4e-11 75.5 147 35.4
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 7.1e-11 75.1 147 34.0
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 9.2e-11 74.7 147 35.4
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 9.2e-11 74.7 156 34.0
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 9.2e-11 74.7 151 35.1
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 1.6e-10 73.9 151 33.1
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 2.1e-10 73.6 165 36.4
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 2.1e-10 73.6 165 36.4
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 2.7e-10 73.2 191 33.5
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 3.5e-10 72.8 161 34.2
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 6.0e-10 72.0 179 35.2
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 6.0e-10 72.0 179 35.2
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 1.0e-09 71.2 145 34.5
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.7e-09 70.5 161 34.2
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.3e-09 70.1 140 33.6
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 5.1e-09 68.9 150 36.7
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 5.1e-09 68.9 150 36.7
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 3.3e-08 66.2 110 39.1
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 1.6e-07 63.9 183 31.7
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.1e-07 63.5 137 32.8
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.1e-07 63.5 137 32.8
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 4.7e-07 62.4 139 36.0
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 4.7e-07 62.4 139 36.0
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 4.0e-06 59.3 168 28.6
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.0e-06 59.3 161 31.1


User provided reference genes

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