Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 6.1e-236 820.5 423 100.0
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 2.2e-201 705.7 430 85.6
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 4.3e-197 691.4 426 85.2
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 1.6e-196 689.5 426 85.0
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 2.3e-195 685.6 427 83.6
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 9.2e-192 673.7 370 93.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.5e-189 666.4 400 86.0
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 2.3e-187 659.1 367 92.1
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 4.4e-186 654.8 401 83.8
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 8.6e-182 640.6 404 81.4
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 9.5e-181 637.1 366 88.0
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 4.3e-173 611.7 432 76.2
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 3.8e-153 545.4 323 87.6
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 1.9e-144 516.5 418 64.6
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 2.5e-144 516.2 384 67.4
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.2e-144 515.4 418 64.8
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 5.5e-144 515.0 427 63.0
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 7.1e-144 514.6 404 65.1
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 4.6e-143 511.9 363 70.5
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.3e-142 510.4 368 69.3
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.8e-142 510.0 366 69.7
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.3e-142 509.6 387 65.6
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 3.0e-142 509.2 429 61.8
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 5.1e-142 508.4 355 70.4
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 5.1e-142 508.4 353 71.4
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 1.9e-141 506.5 390 65.4
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 7.4e-141 504.6 388 66.8
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 7.4e-141 504.6 451 60.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 2.8e-140 502.7 347 72.0
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 4.8e-140 501.9 355 70.7
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 6.3e-140 501.5 365 69.0
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 6.3e-140 501.5 389 66.3
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 2.4e-139 499.6 355 70.4
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 3.1e-139 499.2 388 66.0
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.3e-139 498.4 392 65.6
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 3.4e-138 495.7 371 67.9
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 4.5e-138 495.4 385 64.7
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 7.6e-138 494.6 363 68.0
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 7.6e-138 494.6 367 67.3
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.0e-137 494.2 387 65.6
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 1.0e-137 494.2 365 68.2
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 3.8e-137 492.3 383 65.5
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 3.8e-137 492.3 374 66.3
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 1.1e-136 490.7 354 69.5
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 1.4e-136 490.3 426 62.2
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 1.9e-136 490.0 353 70.0
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.9e-136 490.0 392 65.1
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 1.9e-136 490.0 398 63.6
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 2.5e-136 489.6 413 62.0
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.5e-136 489.6 372 66.7
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 2.5e-136 489.6 365 66.6
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 3.2e-136 489.2 356 69.4
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 3.2e-136 489.2 418 62.4
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 4.2e-136 488.8 353 68.6
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 5.5e-136 488.4 396 62.9
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 7.2e-136 488.0 354 68.1
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 3.6e-135 485.7 420 61.2
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 7.9e-135 484.6 368 65.5
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 1.0e-134 484.2 366 66.7
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 3.0e-134 482.6 356 69.1
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 3.0e-134 482.6 355 68.2
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 3.3e-133 479.2 390 62.1
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.7e-132 476.9 389 63.2
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 4.8e-132 475.3 352 68.2
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 6.3e-132 474.9 432 60.0
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 8.2e-132 474.6 355 65.9
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 3.1e-131 472.6 344 69.5
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.1e-131 472.6 369 65.3
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 7.7e-130 468.0 369 64.8
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 7.7e-130 468.0 355 65.6
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 5.0e-129 465.3 338 68.0
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 6.5e-129 464.9 388 62.4
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 6.5e-129 464.9 355 65.1
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 8.5e-129 464.5 377 60.7
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 2.7e-127 459.5 423 56.7
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 2.7e-127 459.5 423 56.7
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 3.0e-126 456.1 341 66.9
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.9e-126 455.7 362 64.9
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.1e-126 455.3 360 64.2
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 5.1e-126 455.3 361 65.1
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 1.3e-124 450.7 369 63.4
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 3.7e-124 449.1 391 59.8
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.4e-123 446.4 353 63.5
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 3.1e-123 446.0 325 68.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 4.1e-123 445.7 408 58.3
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 7.2e-120 434.9 315 68.3
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 7.2e-120 434.9 354 63.0
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 4.7e-119 432.2 345 65.2
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 6.1e-119 431.8 327 68.2
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 1.4e-115 420.6 317 66.2
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 5.3e-115 418.7 321 65.7
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 4.5e-114 415.6 273 71.8
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 3.2e-112 409.5 293 70.0
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 1.0e-110 404.4 282 78.7
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 1.1e-104 384.4 355 55.2
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 6.8e-102 375.2 353 53.0
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.1e-99 365.9 359 51.5
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 3.3e-96 356.3 347 51.9
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 2.8e-87 326.6 269 59.5
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 8.6e-81 305.1 254 59.4
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 5.6e-80 302.4 259 62.2
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.8e-79 300.1 415 45.3
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 1.2e-77 294.7 187 79.1
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.9e-76 290.0 340 46.2
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.7e-68 264.2 182 73.6
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.2e-66 258.1 362 43.6
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 1.0e-65 255.0 184 64.1
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.3e-64 250.0 414 36.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.3e-64 250.0 414 36.0
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-61 241.5 412 34.7
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 1.9e-59 234.2 475 35.2
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.1e-50 204.1 527 27.5
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 2.5e-48 197.2 358 37.7
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 3.7e-39 166.8 152 55.3
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 2.1e-34 151.0 166 44.0
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 4.0e-30 136.7 125 50.4
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 1.9e-19 101.3 71 69.0
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 1.2e-18 98.6 66 74.2
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.4e-17 95.1 203 34.0
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 8.8e-17 92.4 181 35.4
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 1.3e-15 88.6 65 67.7
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.3e-15 86.3 172 35.5
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 8.2e-15 85.9 175 32.0
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 5.3e-14 83.2 61 60.7
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 1.2e-13 82.0 66 62.1
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 9.4e-11 72.4 53 71.7


User provided reference genes

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