Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28750 Arabidopsis thaliana HOM05D011134 ORTHO05D012144 2.5e-160 568.9 334 100.0
AL5G18480 Arabidopsis lyrata HOM05D011134 ORTHO05D012144 1.1e-115 420.6 394 64.0
CARHR151750 Cardamine hirsuta HOM05D011134 ORTHO05D012144 6.6e-68 261.9 231 61.9
Sp2g17400 Schrenkiella parvula HOM05D011134 ORTHO05D012144 6.8e-65 251.9 238 59.7
Carub.0005s0730 Capsella rubella HOM05D011134 ORTHO05D012144 3.0e-60 236.5 340 45.6
BcaB04g19482 Brassica carinata HOM05D011134 ORTHO05D012144 1.8e-57 227.3 335 42.4
BcaC06g33638 Brassica carinata HOM05D011134 ORTHO05D012144 2.9e-55 219.9 355 44.8
BolC7t44286H Brassica oleracea HOM05D011134 ORTHO05D012144 5.4e-54 215.7 359 46.2
C07p37690 Brassica napus HOM05D011134 ORTHO05D012144 1.2e-53 214.5 222 52.7
A06p40360 Brassica napus HOM05D011134 ORTHO05D012144 7.8e-53 211.8 224 52.2
BraA06t26954Z Brassica rapa HOM05D011134 ORTHO05D012144 7.8e-53 211.8 224 52.2
A09p03770 Brassica napus HOM05D011134 ORTHO05D012144 7.3e-51 205.3 340 39.7
C09p03970 Brassica napus HOM05D011134 ORTHO05D012144 7.3e-51 205.3 337 40.4
BolC9t53329H Brassica oleracea HOM05D011134 ORTHO05D012144 7.3e-51 205.3 337 40.4
BraA09t36015Z Brassica rapa HOM05D011134 ORTHO05D012144 1.8e-49 200.7 340 39.1
BcaC04g23864 Brassica carinata HOM05D011134 ORTHO05D012144 9.9e-48 194.9 337 38.9
BcaC06g30897 Brassica carinata HOM05D011134 ORTHO05D012144 1.9e-46 190.7 224 48.7
Aa31LG2G4480 Aethionema arabicum HOM05D011134 ORTHO05D012144 2.3e-36 157.1 188 45.2
AT5G39880 Arabidopsis thaliana HOM05D010681 ORTHO05D014389 5.3e-25 119.4 361 30.2
CARHR262300 Cardamine hirsuta HOM05D010681 ORTHO05D014389 5.3e-25 119.4 195 35.4
AL7G50260 Arabidopsis lyrata HOM05D010681 ORTHO05D014389 2.0e-24 117.5 258 32.6
Carub.0007s3584 Capsella rubella HOM05D010681 ORTHO05D014389 2.0e-24 117.5 370 30.0
Thhalv10027713m.g Eutrema salsugineum HOM05D010681 ORTHO05D014389 2.6e-24 117.1 196 37.8
Sp7g02160 Schrenkiella parvula HOM05D010681 ORTHO05D014389 6.0e-21 105.9 196 36.2
BcaB02g07964 Brassica carinata HOM05D010681 ORTHO05D014389 1.9e-19 100.9 192 32.8
BcaB02g07967 Brassica carinata HOM05D010681 ORTHO05D014389 2.5e-19 100.5 192 32.8
BcaB02g07963 Brassica carinata HOM05D010681 ORTHO05D014389 3.3e-19 100.1 192 32.3
THA.LOC104808339 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 7.4e-19 99.0 254 31.1
THA.LOC104808337 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.3e-18 98.2 254 31.1
THA.LOC104808338 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.3e-18 98.2 254 30.3
THA.LOC104808340 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 3.7e-18 96.7 254 31.1
BcaC02g08998 Brassica carinata HOM05D010681 ORTHO05D014389 9.0e-17 92.0 196 31.1
BolC4t26368H Brassica oleracea HOM05D010681 ORTHO05D014389 9.0e-17 92.0 196 31.1
C04p47670 Brassica napus HOM05D010681 ORTHO05D014389 4.5e-16 89.7 196 31.1
A04p13910 Brassica napus HOM05D010681 ORTHO05D014389 5.9e-16 89.4 192 29.7
BraA04t17056Z Brassica rapa HOM05D010681 ORTHO05D014389 5.9e-16 89.4 192 29.7
THA.LOC104805451 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 3.8e-15 86.7 252 29.8


User provided reference genes

Program Settings