Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G28455 Arabidopsis thaliana HOM05D009946 ORTHO05D004401 4.3e-37 157.5 82 100.0
Sp2g17220 Schrenkiella parvula HOM05D009946 ORTHO05D004401 5.8e-34 147.1 82 91.5
AL5G18080 Arabidopsis lyrata HOM05D009946 ORTHO05D004401 1.7e-33 145.6 82 90.2
Carub.0005s0698 Capsella rubella HOM05D009946 ORTHO05D004401 4.9e-33 144.1 82 90.2
Thhalv10005220m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 6.0e-31 137.1 82 85.4
CARHR292510 Cardamine hirsuta HOM05D009946 ORTHO05D004401 3.9e-30 134.4 82 82.9
C09p03880 Brassica napus HOM05D009946 ORTHO05D004401 5.1e-30 134.0 82 85.4
A09p03680 Brassica napus HOM05D009946 ORTHO05D004401 1.9e-29 132.1 82 84.1
BolC9t53314H Brassica oleracea HOM05D009946 ORTHO05D004401 2.5e-29 131.7 82 84.1
BcaC03g17517 Brassica carinata HOM05D009946 ORTHO05D004401 8.1e-28 126.7 82 82.9
BolC2t11540H Brassica oleracea HOM05D009946 ORTHO05D004401 8.1e-28 126.7 82 82.9
BcaB04g19463 Brassica carinata HOM05D009946 ORTHO05D004401 4.9e-25 117.5 70 84.3
BcaC04g23875 Brassica carinata HOM05D009946 ORTHO05D004401 8.4e-25 116.7 75 80.0
C07p37510 Brassica napus HOM05D009946 ORTHO05D004401 1.1e-24 116.3 82 75.6
BolC7t44264H Brassica oleracea HOM05D009946 ORTHO05D004401 1.1e-24 116.3 82 75.6
BraA09t36003Z Brassica rapa HOM05D009946 ORTHO05D004401 4.2e-24 114.4 82 74.4
C02p54790 Brassica napus HOM05D009946 ORTHO05D004401 2.1e-23 112.1 70 81.4
A02p35950 Brassica napus HOM05D009946 ORTHO05D004401 2.7e-23 111.7 70 82.9
BraA02t08594Z Brassica rapa HOM05D009946 ORTHO05D004401 2.7e-23 111.7 70 82.9
A06p40520 Brassica napus HOM05D009946 ORTHO05D004401 3.3e-21 104.8 82 68.3
BraA06t26971Z Brassica rapa HOM05D009946 ORTHO05D004401 3.3e-21 104.8 82 68.3
BcaC06g33736 Brassica carinata HOM05D009946 ORTHO05D004401 5.3e-19 97.4 70 72.9
Aa31LG2G4620 Aethionema arabicum HOM05D009946 ORTHO05D004401 1.0e-17 93.2 81 63.0
Thhalv10028314m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 2.7e-15 85.1 81 63.0
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 4.8e-12 74.3 94 47.9
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.0e-11 71.2 91 47.3
Sp7g02070 Schrenkiella parvula HOM05D009946 ORTHO05D004401 1.2e-10 69.7 75 56.0
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 1.2e-10 69.7 91 46.2
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 2.0e-10 68.9 90 47.8
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 5.8e-10 67.4 91 47.3
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 6.5e-09 63.9 94 42.6
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.4e-08 62.8 103 38.8
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.9e-08 62.4 83 42.2
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 3.2e-08 61.6 94 41.5
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 4.2e-08 61.2 104 43.3
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 5.5e-08 60.8 93 44.1
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 9.3e-08 60.1 81 38.3
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 9.3e-08 60.1 74 45.9
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.2e-07 59.7 89 41.6
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 1.2e-07 59.7 49 59.2
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.2e-07 59.7 83 41.0
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.2e-07 59.7 83 41.0
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 1.6e-07 59.3 86 41.9
Cfa007493 Carpinus fangiana HOM05D004965 ORTHO05D004401 2.1e-07 58.9 81 45.7
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 2.1e-07 58.9 91 40.7
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 2.1e-07 58.9 90 40.0
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 2.7e-07 58.5 106 39.6
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 2.7e-07 58.5 81 46.9
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.7e-07 58.5 91 40.7
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 3.5e-07 58.2 81 40.7
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.5e-07 58.2 85 45.9
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 6.1e-07 57.4 92 38.0
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 7.9e-07 57.0 81 35.8
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 7.9e-07 57.0 85 43.5
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.0e-06 56.6 81 44.4
Ciclev10013642m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.8e-06 55.8 88 42.0
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 1.8e-06 55.8 74 48.6
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 1.8e-06 55.8 93 37.6
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.8e-06 55.8 90 40.0
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 3.0e-06 55.1 94 43.6
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 3.0e-06 55.1 94 40.4
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 3.9e-06 54.7 84 41.7
vmacro05780 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 3.9e-06 54.7 82 43.9
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 5.1e-06 54.3 79 43.0
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 5.1e-06 54.3 84 42.9
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 5.1e-06 54.3 80 45.0
Rhsim10G0029300 Rhododendron simsii HOM05D004965 ORTHO05D004401 6.7e-06 53.9 87 43.7
SalBow1G8504 Salvia bowleyana HOM05D004965 ORTHO05D004401 6.7e-06 53.9 52 53.8
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 8.7e-06 53.5 90 41.1
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 8.7e-06 53.5 94 39.4


User provided reference genes

Program Settings