Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 2.1e-106 389.0 199 100.0
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 3.7e-82 308.5 201 81.1
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 8.2e-74 280.8 197 75.6
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 3.9e-68 261.9 197 69.5
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 2.0e-59 233.0 201 63.7
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.0e-56 223.0 202 62.4
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 2.6e-56 222.6 197 64.0
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 4.2e-54 215.3 197 59.4
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 2.1e-53 213.0 188 61.7
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 2.1e-53 213.0 188 61.7
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.7e-53 212.6 191 60.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 6.1e-53 211.5 190 62.1
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 3.0e-52 209.1 190 61.1
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.3e-50 203.8 188 59.6
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.7e-50 203.4 192 62.5
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.7e-50 203.4 188 59.6
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 5.9e-48 194.9 186 57.5
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 4.0e-44 182.2 187 55.6
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.0e-43 179.9 187 54.5
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.0e-43 179.9 187 54.5
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.9e-38 163.3 186 52.2
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.2e-38 162.2 200 45.5
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.5e-38 161.8 202 47.5
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.7e-37 158.7 199 45.7
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.0e-36 155.6 191 46.1
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 5.2e-36 155.2 191 48.2
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.4e-33 147.1 165 52.7
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 5.4e-33 145.2 195 46.2
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.5e-32 142.5 197 45.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.5e-32 142.5 197 44.7
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.5e-32 142.1 198 41.9
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.3e-31 140.6 198 42.9
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.3e-31 140.6 201 40.8
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.2e-31 139.8 201 42.3
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 2.9e-31 139.4 203 42.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 5.0e-31 138.7 200 42.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 6.5e-31 138.3 186 43.5
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 8.5e-31 137.9 196 45.4
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.9e-30 136.7 186 42.5
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 4.2e-30 135.6 202 46.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.2e-29 134.0 195 42.6
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.6e-29 133.7 213 41.3
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 3.0e-28 129.4 202 44.1
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 6.8e-28 128.3 202 41.6
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.2e-27 127.5 186 41.9
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.2e-27 127.5 194 41.8
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.5e-27 127.1 186 41.4
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 3.4e-27 125.9 187 40.1
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 4.4e-27 125.6 187 39.6
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.3e-26 124.0 197 40.6
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.3e-26 124.0 200 39.0
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.2e-26 123.2 196 40.3
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.9e-26 122.1 196 36.7
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 6.3e-26 121.7 186 41.9
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.1e-25 120.9 184 45.1
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.4e-25 120.6 191 39.8
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.4e-25 120.6 186 38.7
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.4e-25 120.6 195 41.0
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 3.1e-25 119.4 194 37.6
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 4.1e-25 119.0 193 39.4
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 5.4e-25 118.6 199 36.2
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 5.4e-25 118.6 198 35.9
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 7.0e-25 118.2 186 45.2
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 7.0e-25 118.2 199 36.7
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 9.2e-25 117.9 192 39.6
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-24 117.1 192 40.1
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.6e-24 117.1 194 39.7
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.0e-24 116.7 196 41.8
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 3.5e-24 115.9 186 38.7
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 3.5e-24 115.9 186 38.7
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.5e-24 115.9 200 40.5
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 5.9e-24 115.2 183 39.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.7e-23 113.6 199 38.2
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.3e-23 113.2 199 39.2
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.3e-23 113.2 199 39.2
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.3e-23 113.2 199 38.2
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.9e-23 112.8 199 38.2
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.9e-23 112.8 198 39.4
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.0e-23 112.1 196 36.2
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.5e-22 110.5 198 39.4
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.5e-22 110.5 196 39.3
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 4.3e-22 109.0 192 37.5
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 4.3e-22 109.0 192 38.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 9.5e-22 107.8 187 41.2
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.8e-21 106.3 194 35.6
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.8e-21 106.3 219 37.4
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 8.0e-21 104.8 196 36.2
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 2.3e-20 103.2 193 36.8
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 4.0e-20 102.4 186 38.2
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 6.8e-20 101.7 201 33.8
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 6.8e-20 101.7 186 34.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.0e-19 100.1 188 37.2
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.6e-19 99.8 183 36.1
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 3.4e-19 99.4 184 37.0
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 5.7e-19 98.6 192 35.4
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 7.5e-19 98.2 203 37.4
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 7.5e-19 98.2 192 35.9
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 9.8e-19 97.8 182 35.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.3e-18 97.4 187 34.8
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.2e-18 96.7 197 35.0
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 2.2e-18 96.7 188 36.7
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.2e-17 92.8 224 33.0
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 4.1e-17 92.4 183 33.9
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 5.4e-17 92.0 220 32.3
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 5.4e-17 92.0 185 38.4
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.2e-16 90.9 187 32.6
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 4.6e-16 89.0 196 32.7
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 4.6e-16 89.0 188 35.1
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.9e-16 88.6 191 30.9
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.3e-15 87.4 187 33.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.3e-15 87.4 195 32.3
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 3.9e-15 85.9 197 32.5
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.9e-15 85.9 184 34.8
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.6e-13 80.5 191 29.8
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 2.8e-13 79.7 184 32.1
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 6.8e-12 75.1 185 30.8
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 4.4e-11 72.4 182 29.7
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 3.7e-10 69.3 185 26.5
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 3.7e-10 69.3 185 27.0
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 8.3e-10 68.2 167 29.9
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 5.4e-09 65.5 51 60.8
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.5e-08 62.8 109 32.1
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 3.0e-07 59.7 190 24.7
Aa31sc17G60 Aethionema arabicum HOM05D005478 ORTHO05D006426 3.9e-07 59.3 72 50.0
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.1e-06 57.8 72 43.1
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.5e-06 57.4 84 44.0
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 5.6e-06 55.5 135 34.8
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 7.3e-06 55.1 50 46.0


User provided reference genes

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