Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 5.2e-60 234.2 119 100.0
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 9.3e-41 170.2 89 92.1
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 2.7e-40 168.7 91 89.0
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 5.1e-39 164.5 91 86.8
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 6.7e-39 164.1 90 88.9
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 2.5e-38 162.2 91 85.7
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 2.5e-38 162.2 92 89.1
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 5.6e-38 161.0 91 83.5
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 5.6e-38 161.0 91 84.6
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 5.6e-38 161.0 91 83.5
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 9.6e-38 160.2 91 84.6
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 9.6e-38 160.2 91 84.6
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 9.6e-38 160.2 91 84.6
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 4.8e-37 157.9 91 84.6
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 8.1e-37 157.1 91 82.4
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 8.1e-37 157.1 91 82.4
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 1.4e-36 156.4 90 82.2
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 1.2e-35 153.3 87 83.9
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 1.0e-26 123.6 93 67.7
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 1.3e-26 123.2 91 68.1
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 8.4e-26 120.6 84 67.9
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 1.4e-25 119.8 72 77.8
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 1.9e-25 119.4 97 63.9
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 3.2e-25 118.6 92 65.2
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 3.2e-25 118.6 89 66.3
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 3.2e-25 118.6 89 66.3
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 5.5e-25 117.9 90 67.8
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 5.5e-25 117.9 90 67.8
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 7.2e-25 117.5 91 64.8
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 7.2e-25 117.5 89 65.2
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 1.2e-24 116.7 93 63.4
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 1.2e-24 116.7 82 65.9
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 1.2e-24 116.7 82 68.3
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 2.1e-24 115.9 89 65.2
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 2.7e-24 115.5 90 66.7
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 3.5e-24 115.2 84 67.9
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 6.1e-24 114.4 84 61.9
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 6.1e-24 114.4 81 67.9
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 7.9e-24 114.0 91 63.7
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 7.9e-24 114.0 84 66.7
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 7.9e-24 114.0 82 68.3
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 1.0e-23 113.6 72 75.0
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 1.0e-23 113.6 73 74.0
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 1.8e-23 112.8 78 71.8
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.0e-23 112.1 91 63.7
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.0e-23 112.1 91 63.7
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 3.9e-23 111.7 93 62.4
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 6.7e-23 110.9 71 73.2
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 8.7e-23 110.5 83 67.5
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 1.1e-22 110.2 73 71.2
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 1.1e-22 110.2 70 74.3
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 1.1e-22 110.2 71 71.8
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 1.1e-22 110.2 93 59.1
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 1.5e-22 109.8 93 59.1
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 1.9e-22 109.4 82 67.1
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 1.9e-22 109.4 70 74.3
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 1.9e-22 109.4 91 58.2
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 2.5e-22 109.0 82 64.6
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 2.5e-22 109.0 91 61.5
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 2.5e-22 109.0 91 61.5
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 3.3e-22 108.6 84 63.1
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 3.3e-22 108.6 76 68.4
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 5.7e-22 107.8 89 60.7
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 7.4e-22 107.5 69 73.9
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 1.3e-21 106.7 73 68.5
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 1.6e-21 106.3 76 63.2
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 1.6e-21 106.3 70 71.4
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 2.2e-21 105.9 71 71.8
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 2.8e-21 105.5 61 82.0
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 3.7e-21 105.1 70 68.6
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 3.7e-21 105.1 84 60.7
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 4.8e-21 104.8 72 66.7
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 6.3e-21 104.4 73 65.8
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 8.2e-21 104.0 76 61.8
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 8.2e-21 104.0 76 64.5
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 8.2e-21 104.0 70 71.4
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 8.2e-21 104.0 90 60.0
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.1e-20 103.6 73 64.4
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 1.4e-20 103.2 84 58.3
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 1.4e-20 103.2 66 75.8
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 1.4e-20 103.2 73 65.8
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 1.4e-20 103.2 88 59.1
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 2.4e-20 102.4 62 75.8
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 2.4e-20 102.4 81 63.0
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 3.1e-20 102.1 71 66.2
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 3.1e-20 102.1 60 80.0
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 6.9e-20 100.9 73 64.4
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 9.0e-20 100.5 92 54.3
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 3.4e-19 98.6 122 43.4
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 4.5e-19 98.2 73 60.3
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 4.5e-19 98.2 84 57.1
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 5.9e-19 97.8 71 66.2
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 5.9e-19 97.8 81 60.5
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 1.0e-18 97.1 66 66.7
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 1.7e-18 96.3 73 63.0
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 1.7e-18 96.3 66 68.2
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 2.2e-18 95.9 72 65.3
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 6.5e-18 94.4 60 70.0
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 1.9e-17 92.8 58 74.1
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.9e-17 92.8 61 68.9
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 2.5e-17 92.4 60 70.0
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 3.2e-17 92.0 61 70.5
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 4.3e-14 81.6 78 53.8
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 6.3e-13 77.8 59 61.0
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 2.4e-12 75.9 59 57.6
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 5.3e-12 74.7 70 57.1
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 5.3e-12 74.7 68 51.5
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 2.0e-11 72.8 60 55.0
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 2.6e-11 72.4 69 56.5
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 4.5e-11 71.6 69 53.6
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 4.5e-11 71.6 63 57.1
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 1.9e-09 66.2 61 47.5
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 4.2e-09 65.1 61 47.5


User provided reference genes

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